RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CA9Q16790 459 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 DCAF6Q58WW2 860 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 DUPD1Q68J44 220 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 TMCO2Q7Z6W1 182 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 TMEM173Q86WV6 379 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 RFX6Q8HWS3 928 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 SPATA2LQ8IUW3 424 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 CMASQ8NFW8 434 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 C11orf84Q9BUA3 381 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 DDX23Q9BUQ8 820 aaKnown RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 SNRNP25Q9BV90 132 aaKnown RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 COX16Q9P0S2 106 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
RAB5C-202ENST00000393860 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 PTPRDP23468 1912 aa20.56■□□□□ 0.88
RAB5C-202ENST00000393860 YJEFN3A6XGL0 299 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 E7ENQ6 273 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 HOXA2O43364 376 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 TRAPPC3O43617 180 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 ALDH2P05091 517 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 ITGB8P26012 769 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 PTPN7P35236 360 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 DAOAP59103 153 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 KRT17Q04695 432 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 IFRD2Q12894 506 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 CUL1Q13616 776 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 PPP1R7Q15435 360 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 TRIP13Q15645 432 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 VARS2Q5ST30 1063 aaKnown RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 MAGEB5Q9BZ81 275 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 PARNO95453 639 aaKnown RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 DESP17661 470 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 CYP2F1P24903 491 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 MATKP42679 507 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 YWHAZP63104 245 aaKnown RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 KRT81Q14533 505 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 RAB41Q5JT25 222 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 SYPL2Q5VXT5 272 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 PRUNE1Q86TP1 453 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 STKLD1Q8NE28 680 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 BCL7CQ8WUZ0 217 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 COLEC11Q9BWP8 271 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 CSNK1G1Q9HCP0 422 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 DMAP1Q9NPF5 467 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 ABI2Q9NYB9 513 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-202ENST00000393860 NAALADL1Q9UQQ1 740 aa20.55■□□□□ 0.88
RAB5C-202ENST00000393860 MKI67P46013 3256 aaKnown RBP20.54■□□□□ 0.88
RAB5C-202ENST00000393860 ATP8B1O43520 1251 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 CST8O60676 142 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 RPL21P46778 160 aaKnown RBP20.54■□□□□ 0.88
RAB5C-202ENST00000393860 IKBKEQ14164 716 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 CCNG2Q16589 344 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 OTUD1Q5VV17 481 aaPredicted RBP20.54■□□□□ 0.88
RAB5C-202ENST00000393860 FAM117BQ6P1L5 589 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 CNKSR3Q6P9H4 555 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 EMBQ6PCB8 327 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 CCDC185Q8N715 623 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 TSEN2Q8NCE0 465 aaKnown RBP20.54■□□□□ 0.88
RAB5C-202ENST00000393860 SEC14L1Q92503 715 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 RUNDC3BQ96NL0 473 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 PGLYRP2Q96PD5 576 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 MRPL9Q9BYD2 267 aaKnown RBP20.54■□□□□ 0.88
RAB5C-202ENST00000393860 ZCWPW1Q9H0M4 648 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 FAM114A2Q9NRY5 505 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 DNPEPQ9ULA0 475 aa20.54■□□□□ 0.88
RAB5C-202ENST00000393860 OAZ2O95190 189 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 GALTP07902 379 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ARPP19P56211 112 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 DPYSL3Q14195 570 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 MAPRE1Q15691 268 aaKnown RBP20.53■□□□□ 0.88
RAB5C-202ENST00000393860 CTXN3Q4LDR2 81 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ARCQ7LC44 396 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 CENPIQ92674 756 aaPredicted RBP20.53■□□□□ 0.88
RAB5C-202ENST00000393860 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 LIASO43766 372 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 FBXO21O94952 628 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ZBED1O96006 694 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 FYNP06241 537 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 GRIK1P39086 918 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 VPS41P49754 854 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ARSEP51690 589 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 TAZQ16635 292 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 FUT10Q6P4F1 479 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 FAM131BQ86XD5 332 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 SCN4BQ8IWT1 228 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 LRRC43Q8N309 656 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 SCAMP5Q8TAC9 235 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 ADAM32Q8TC27 787 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 CAVIN3Q969G5 261 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
RAB5C-202ENST00000393860 CNGB3Q9NQW8 809 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 HPCAL4Q9UM19 191 aa20.53■□□□□ 0.88
RAB5C-202ENST00000393860 SYN3O14994 580 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 NME3Q13232 169 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 SLC25A52Q3SY17 297 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 PPP6R3Q5H9R7 873 aaPredicted RBP20.52■□□□□ 0.88
RAB5C-202ENST00000393860 SDHAF4Q5VUM1 108 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 C4orf50Q6ZRC1 276 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 BHLHA9Q7RTU4 235 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms