RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 DTNBP1Q96EV8 351 aa13.83□□□□□ -0.2
GSE1-202ENST00000393243 ENTPD7Q9NQZ7 604 aa13.83□□□□□ -0.2
GSE1-202ENST00000393243 SH3BP4Q9P0V3 963 aa13.83□□□□□ -0.2
GSE1-202ENST00000393243 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.2
GSE1-202ENST00000393243 IGSF9BQ9UPX0 1349 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 LRRIQ3A6PVS8 624 aaPredicted RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CLCN3P51790 818 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 POU6F1Q14863 301 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 NEDD8Q15843 81 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SEL1L3Q68CR1 1132 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 EPHX4Q8IUS5 362 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 FBXO32Q969P5 355 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 HIC2Q96JB3 615 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 BATF3Q9NR55 127 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SLC38A7Q9NVC3 462 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SESN1Q9Y6P5 492 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 F5H5T6 163 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 FAM20BO75063 409 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 EPB41L4AQ9HCS5 686 aaPredicted RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 DCDC2Q9UHG0 476 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 C1orf232A0A0U1RR37 186 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SLC2A4P14672 509 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CCT8P50990 548 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 KCTD19Q17RG1 926 aaPredicted RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 KCTD21Q4G0X4 260 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 ANKS6Q68DC2 871 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 NFKBIZQ9BYH8 718 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 TAF6P49848 677 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SERPINB8P50452 374 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 STX5Q13190 355 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 TFAP2DQ7Z6R9 452 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 SERPINB12Q96P63 405 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 PPP1R10Q96QC0 940 aaKnown RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 ISCA1Q9BUE6 129 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 AGPAT3Q9NRZ7 376 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CBX4O00257 560 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 DNALI1O14645 258 aaPredicted RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 NCF4Q15080 339 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 BRINP3Q76B58 766 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 LINC00523Q86TU6 105 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 WDR36Q8NI36 951 aaKnown RBP13.82□□□□□ -0.2
GSE1-202ENST00000393243 MIEF2Q96C03 454 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 VPS33BQ9H267 617 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 ZMYM5Q9UJ78 669 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 CHKBQ9Y259 395 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 KLHL20Q9Y2M5 609 aa13.82□□□□□ -0.2
GSE1-202ENST00000393243 ZNF862O60290 1169 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 ATP9AO75110 1047 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 ANXA9O76027 345 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 NUP62P37198 522 aaPredicted RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 SNAPC2Q13487 334 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CRYMQ14894 314 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 DDI1Q8WTU0 396 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 RNF19AQ9NV58 838 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 ODC1P11926 461 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 GUCA1AP43080 201 aaPredicted RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 CCNG1P51959 295 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 RCAN1P53805 252 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 ARMCX4Q5H9R4 360 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.81□□□□□ -0.2
GSE1-202ENST00000393243 KIF2CQ99661 725 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 KLHL4Q9C0H6 718 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CYB561D2O14569 222 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 GLRA3O75311 464 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 EDEM1Q92611 657 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 EFCAB1Q9HAE3 211 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 DAPK2Q9UIK4 370 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 FOXP2O15409 715 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 TFDP3Q5H9I0 405 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 SLFN11Q7Z7L1 901 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 SLC20A1Q8WUM9 679 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CIPCQ9C0C6 399 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 ITGAXP20702 1163 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 RASA1P20936 1047 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 YWHAQP27348 245 aa13.81□□□□□ -0.2
GSE1-202ENST00000393243 SLC11A2P49281 568 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms