RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NSRP1Q9H0G5 558 aaKnown RBP14.91□□□□□ -0.02
MKS1-203ENST00000393120 VPS37BQ9H9H4 285 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 BCLAF3A2AJT9 711 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 DUSP11O75319 330 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 AKR1A1P14550 325 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 GPX6P59796 221 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 MPP2Q14168 576 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 ITIH4Q14624 930 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 DPYSL2Q16555 572 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 ZC3H12AQ5D1E8 599 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 EFHC2Q5JST6 749 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 FNBP1LQ5T0N5 605 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 NPNTQ6UXI9 565 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 ADGRF2Q8IZF7 708 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PDIK1LQ8N165 341 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 ARRDC4Q8NCT1 418 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 CCDC197Q8NCU1 140 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PCDH19Q8TAB3 1148 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PYROXD1Q8WU10 500 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 HNRNPABQ99729 332 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 LPIN3Q9BQK8 851 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 FRMD8Q9BZ67 464 aaPredicted RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 KCNK9Q9NPC2 374 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 TBK1Q9UHD2 729 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 RASA4BC9J798 803 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 XPO1O14980 1071 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 CHADO15335 359 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 RASA4O43374 803 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 FSBPO95073 299 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 CCDC130P13994 396 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 ZFXP17010 805 aaPredicted RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 BCAR1P56945 870 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 RNASELQ05823 741 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 EFHC1Q5JVL4 640 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 SRRM1Q8IYB3 904 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 ANKS4BQ8N8V4 417 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 SGSM3Q96HU1 749 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PPP1R10Q96QC0 940 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 PRDM16Q9HAZ2 1276 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 PAK5Q9P286 719 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 RABGEF1Q9UJ41 708 aa14.9□□□□□ -0.02
MKS1-203ENST00000393120 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
MKS1-203ENST00000393120 CLUHO75153 1309 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 H7C0C1 242 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 PTGESO14684 152 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 HCRTO43612 131 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 TMEM63AO94886 807 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 ADORA2BP29275 332 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 L1CAMP32004 1257 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 MAGEA6P43360 314 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 ATP5OP48047 213 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 NR2C2P49116 596 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 GEMIN4P57678 1058 aaKnown RBP14.89□□□□□ -0.03
MKS1-203ENST00000393120 XRCC4Q13426 336 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 KCNJ11Q14654 390 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 MSS51Q4VC12 460 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 ZNF618Q5T7W0 954 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 STRADAQ7RTN6 431 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 PSTKQ8IV42 348 aaKnown RBP14.89□□□□□ -0.03
MKS1-203ENST00000393120 B3GALNT2Q8NCR0 500 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 DYDC1Q8WWB3 177 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 DHRS4Q9BTZ2 278 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 ZFYVE28Q9HCC9 887 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 CHST12Q9NRB3 414 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 RNF19AQ9NV58 838 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 TRIP11Q15643 1979 aa14.89□□□□□ -0.03
MKS1-203ENST00000393120 PDCD11Q14690 1871 aaKnown RBP14.89□□□□□ -0.03
MKS1-203ENST00000393120 GOLGA6L7A0A1B0GV03 622 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 FAM47DPA6NHR8 397 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 GOLGA8MH3BSY2 632 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 GABRDO14764 452 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 TNPO2O14787 897 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 PRPF4O43172 522 aaKnown RBP eCLIP14.88□□□□□ -0.03
MKS1-203ENST00000393120 VIMP08670 466 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 IFNAR2P48551 515 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 GJA9P57773 515 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 NKX3-2P78367 333 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 MRPS6P82932 125 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 GAD2Q05329 585 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 TMED2Q15363 201 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 CA9Q16790 459 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 KLHL38Q2WGJ6 581 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 HP1BP3Q5SSJ5 553 aaPredicted RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 TWF2Q6IBS0 349 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 C1orf228Q6PIY5 440 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 CCDC121Q6ZUS5 278 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 ZC3H18Q86VM9 953 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 KCTD13Q8WZ19 329 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 WDR83Q9BRX9 315 aaKnown RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 MTG1Q9BT17 334 aaPredicted RBP14.88□□□□□ -0.03
MKS1-203ENST00000393120 DUSP16Q9BY84 665 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 KDM4CQ9H3R0 1056 aa14.88□□□□□ -0.03
MKS1-203ENST00000393120 ACSS3Q9H6R3 686 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms