RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 PCDHB8Q9UN66 801 aa22.31■■□□□ 1.16
SPHK1-202ENST00000392496 DDHD2O94830 711 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ITGAVP06756 1048 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 MATKP42679 507 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 OVOS1Q6IE37 1185 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ZNF280BQ86YH2 543 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 RFX6Q8HWS3 928 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 COLGALT2Q8IYK4 626 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 DBF4BQ8NFT6 615 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 CCHCR1Q8TD31 782 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 SEPT8Q92599 483 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 APBB2Q92870 758 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 CALN1Q9BXU9 219 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 TBC1D13Q9NVG8 400 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ZNF148Q9UQR1 794 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ENPP3O14638 875 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 KRT14P02533 472 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ITGB1P05556 798 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ATF2P15336 505 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 TKTL1P51854 596 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 CAV1Q03135 178 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 DPYSL3Q14195 570 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 UAP1Q16222 522 aaPredicted RBP22.3■■□□□ 1.16
SPHK1-202ENST00000392496 RAB41Q5JT25 222 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 LRIG3Q6UXM1 1119 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ALLCQ8N6M5 410 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 BBOF1Q8ND07 529 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 ZMIZ2Q8NF64 920 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 MYLPFQ96A32 169 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 PKMYT1Q99640 499 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 CSNK1G1Q9HCP0 422 aa22.3■■□□□ 1.16
SPHK1-202ENST00000392496 POLR3GO15318 223 aaPredicted RBP22.29■■□□□ 1.16
SPHK1-202ENST00000392496 B4GALT3O60512 393 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 KLRC2P26717 231 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 YWHAZP63104 245 aaKnown RBP22.29■■□□□ 1.16
SPHK1-202ENST00000392496 TFDP2Q14188 446 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 KRT81Q14533 505 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 MAPRE1Q15691 268 aaKnown RBP22.29■■□□□ 1.16
SPHK1-202ENST00000392496 GSTA5Q7RTV2 222 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 DEFB106AQ8N104 65 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 ACTL9Q8TC94 416 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 SNRNP25Q9BV90 132 aaKnown RBP22.29■■□□□ 1.16
SPHK1-202ENST00000392496 MAK16Q9BXY0 300 aaKnown RBP22.29■■□□□ 1.16
SPHK1-202ENST00000392496 CNGB3Q9NQW8 809 aa22.29■■□□□ 1.16
SPHK1-202ENST00000392496 ZNF487B1APH4 448 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 APOC4-APOC2K7ER74 178 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 APOC2P02655 101 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 TFE3P19532 575 aaPredicted RBP22.28■■□□□ 1.16
SPHK1-202ENST00000392496 NOS2P35228 1153 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 DYNLT1P63172 113 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 OTUD4Q01804 1114 aaKnown RBP22.28■■□□□ 1.16
SPHK1-202ENST00000392496 GABPB1Q06547 395 aaPredicted RBP22.28■■□□□ 1.16
SPHK1-202ENST00000392496 SLC25A52Q3SY17 297 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 ERMARDQ5T6L9 678 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 RIN2Q8WYP3 895 aaPredicted RBP22.28■■□□□ 1.16
SPHK1-202ENST00000392496 FAM149B1Q96BN6 582 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 ZBTB9Q96C00 473 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 HAUS1Q96CS2 278 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 FAM193BQ96PV7 902 aaPredicted RBP22.28■■□□□ 1.16
SPHK1-202ENST00000392496 SLC2A13Q96QE2 648 aa22.28■■□□□ 1.16
SPHK1-202ENST00000392496 ADCY8P40145 1251 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 NDUFV1P49821 464 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 TSPY1Q01534 308 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 RNASELQ05823 741 aaKnown RBP22.27■■□□□ 1.16
SPHK1-202ENST00000392496 TRIP13Q15645 432 aaPredicted RBP22.27■■□□□ 1.16
SPHK1-202ENST00000392496 RHBDF2Q6PJF5 856 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 GOLGA6L1Q8N7Z2 621 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 UBLCP1Q8WVY7 318 aaPredicted RBP22.27■■□□□ 1.16
SPHK1-202ENST00000392496 RNF157Q96PX1 679 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 ULBP1Q9BZM6 244 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 PCDH18Q9HCL0 1135 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 PLAAQ9Y263 795 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 FAN1Q9Y2M0 1017 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 PCDHB7Q9Y5E2 793 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 HHLA1C9JL84 531 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 GOLGA8KD6RF30 607 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 F8W810 466 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 TP73O15350 636 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 PQBP1O60828 265 aaKnown RBP22.27■■□□□ 1.16
SPHK1-202ENST00000392496 RNF40O75150 1001 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 GJA8P48165 433 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 CACNA2D1P54289 1103 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 DAOAP59103 153 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 SLMAPQ14BN4 828 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 OR10T2Q8NGX3 314 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 NDRG1Q92597 394 aaKnown RBP22.27■■□□□ 1.16
SPHK1-202ENST00000392496 NT5C3BQ969T7 300 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 KCNK16Q96T55 309 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 ADAM33Q9BZ11 813 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 TMEM30AQ9NV96 361 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 STAP1Q9ULZ2 295 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 ATP8A1Q9Y2Q0 1164 aa22.27■■□□□ 1.16
SPHK1-202ENST00000392496 OR1G1P47890 313 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 SULT1E1P49888 294 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 PMS2P54278 862 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 YWHAHQ04917 246 aaPredicted RBP22.26■■□□□ 1.15
SPHK1-202ENST00000392496 MMRN1Q13201 1228 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 DPYSL2Q16555 572 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 ZC3H12AQ5D1E8 599 aaKnown RBP22.26■■□□□ 1.15
SPHK1-202ENST00000392496 ANKRD33Q7Z3H0 272 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms