RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NR1H2P55055 460 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 PKN2Q16513 984 aaKnown RBP20.33■□□□□ 0.85
SHANK1-203ENST00000391813 TTC27Q6P3X3 843 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 SPOCD1Q6ZMY3 1216 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 PLEKHH3Q7Z736 793 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 OR6Y1Q8NGX8 325 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 SH3GL1Q99961 368 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 IDI2Q9BXS1 227 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 TCF7L2Q9NQB0 619 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 PYGMP11217 842 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 CSTF3Q12996 717 aaKnown RBP20.33■□□□□ 0.85
SHANK1-203ENST00000391813 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 NDEL1Q9GZM8 345 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 RABGEF1Q9UJ41 708 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 TMCO1Q9UM00 188 aa20.33■□□□□ 0.85
SHANK1-203ENST00000391813 IGSF9BQ9UPX0 1349 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 ME2P23368 584 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 FAM162AQ96A26 154 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 ANKEF1Q9NU02 776 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 RPS6KL1Q9Y6S9 549 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 HEATR9A2RTY3 570 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 CUL2Q13617 745 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 NBPF12Q5TAG4 269 aaPredicted RBP20.33■□□□□ 0.84
SHANK1-203ENST00000391813 DENND1BQ6P3S1 775 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 RNF180Q86T96 592 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 PARD3BQ8TEW8 1205 aa20.33■□□□□ 0.84
SHANK1-203ENST00000391813 INPP4AQ96PE3 977 aaPredicted RBP20.33■□□□□ 0.84
SHANK1-203ENST00000391813 C1orf232A0A0U1RR37 186 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 CBFA2T3O75081 653 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 ENTPD5O75356 428 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 BLMHQ13867 455 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 ZCCHC9Q8N567 271 aaKnown RBP20.32■□□□□ 0.84
SHANK1-203ENST00000391813 SEPT8Q92599 483 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 GPRASP2Q96D09 838 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 MED15Q96RN5 788 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 TLR2O60603 784 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 FASP25445 335 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 ARPP19P56211 112 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 ITGA9Q13797 1035 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 PDK4Q16654 411 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 COBLL1Q53SF7 1204 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 IER5Q5VY09 327 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 CCDC33Q8N5R6 958 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 GLMNQ92990 594 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 BBS2Q9BXC9 721 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 IL1RL2Q9HB29 575 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 RRAGCQ9HB90 399 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 FAM32AQ9Y421 112 aaKnown RBP20.32■□□□□ 0.84
SHANK1-203ENST00000391813 RRN3P2A6NIE6 340 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 E9PBE3 544 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 KLHL41O60662 606 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 CWF19L1Q69YN2 538 aaKnown RBP20.32■□□□□ 0.84
SHANK1-203ENST00000391813 CCDC81Q6ZN84 652 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 TSHZ1Q6ZSZ6 1077 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 NDNQ99608 321 aa20.32■□□□□ 0.84
SHANK1-203ENST00000391813 SARS2Q9NP81 518 aaKnown RBP20.32■□□□□ 0.84
SHANK1-203ENST00000391813 RAB14P61106 215 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 XIAPP98170 497 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ZNF560Q96MR9 790 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 TMEM121Q9BTD3 319 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 DCUN1D5Q9BTE7 237 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 SP110Q9HB58 689 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 PLGRKTQ9HBL7 147 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHANK1-203ENST00000391813 GOLGA8TH3BQL2 631 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 PBX1P40424 430 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 CPT1AP50416 773 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 RBP5P82980 135 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 TSPY1Q01534 308 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 GLT1D1Q96MS3 346 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 SRPK1Q96SB4 655 aaKnown RBP20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ECSITQ9BQ95 431 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 MXRA8Q9BRK3 442 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ADRA1DP25100 572 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ATP6V1E1P36543 226 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 RAD23AP54725 363 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 FOXD4Q12950 439 aaPredicted RBP20.31■□□□□ 0.84
SHANK1-203ENST00000391813 PDK2Q15119 407 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 PLEKHA5Q9HAU0 1116 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 HMG20AQ9NP66 347 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 STMN3Q9NZ72 180 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 WNT10BO00744 389 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ASNA1O43681 348 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 GSNP06396 782 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 PYGLP06737 847 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 MYL4P12829 197 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ADORA2BP29275 332 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 SOX6P35712 828 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 GMCL1P1Q8NEA9 526 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 SHCBP1Q8NEM2 672 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 RUSC1Q9BVN2 902 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 TMEM245Q9H330 911 aa20.31■□□□□ 0.84
SHANK1-203ENST00000391813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 MYO1GB0I1T2 1018 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 ABHD2P08910 425 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 NCKAP1LP55160 1127 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 AGAP9Q5VTM2 703 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms