RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FAM156AQ8NDB6 213 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.09□□□□□ -1.75
TRAV40-201ENST00000390467 LRTOMTQ8WZ04 291 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 AS3MTQ9HBK9 375 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 TFCP2L1Q9NZI6 479 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 ASAP1Q9ULH1 1129 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 TPCN1Q9ULQ1 816 aa4.09□□□□□ -1.75
TRAV40-201ENST00000390467 PROB1E7EW31 1015 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 RAB27BO00194 218 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 EXOC5O00471 708 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 NTN1O95631 604 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 A1BGP04217 495 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 S100BP04271 92 aaPredicted RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 PARP1P09874 1014 aaKnown RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 ZKSCAN1P17029 563 aaPredicted RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 HOXD9P28356 352 aaPredicted RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 NTSR1P30989 418 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 THBS4P35443 961 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 PGDP52209 483 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 DEUP1Q05D60 604 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 STK3Q13188 491 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 GALEQ14376 348 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 KCNAB1Q14722 419 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 GRM3Q14832 879 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 TRIP6Q15654 476 aaKnown RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 TMEM65Q6PI78 240 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 SHC4Q6S5L8 630 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 DCDC5Q6ZRR9 648 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 KRT73Q86Y46 540 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 NANOGP1Q8N7R0 232 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 OSR1Q8TAX0 266 aaPredicted RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 JDP2Q8WYK2 163 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 MAP4K1Q92918 833 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 COQ8BQ96D53 544 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 KAZALD1Q96I82 304 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 CCDC17Q96LX7 622 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 CHST8Q9H2A9 424 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 DHX36Q9H2U1 1008 aaKnown RBP4.08□□□□□ -1.76
TRAV40-201ENST00000390467 FAM204AQ9H8W3 233 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 SNX15Q9NRS6 342 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 MTMR4Q9NYA4 1195 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 VPS51Q9UID3 782 aa4.08□□□□□ -1.76
TRAV40-201ENST00000390467 TPP1O14773 563 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 DSCR3O14972 297 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 KCNAB3O43448 404 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 MARCH6O60337 910 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 U2AF1L5P0DN76 240 aaPredicted RBP4.07□□□□□ -1.76
TRAV40-201ENST00000390467 TXNP10599 105 aaKnown RBP4.07□□□□□ -1.76
TRAV40-201ENST00000390467 MYF5P13349 255 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 CPT1AP50416 773 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 GATMP50440 423 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 CCT4P50991 539 aaKnown RBP4.07□□□□□ -1.76
TRAV40-201ENST00000390467 U2AF1Q01081 240 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAV40-201ENST00000390467 KCNB1Q14721 858 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 POLD3Q15054 466 aaPredicted RBP4.07□□□□□ -1.76
TRAV40-201ENST00000390467 TMTC4Q5T4D3 741 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 PXDC1Q5TGL8 231 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 CCDC149Q6ZUS6 474 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 USP49Q70CQ1 688 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 RAB11FIP4Q86YS3 637 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 PIGOQ8TEQ8 1089 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 APIPQ96GX9 242 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 TRIM36Q9NQ86 728 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
TRAV40-201ENST00000390467 VSTM5A8MXK1 200 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 TSPAN6O43657 245 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 TMPRSS11DO60235 418 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 PRF1P14222 555 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 PEX2P28328 305 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 CACNB3P54284 484 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 LINC00205P59089 165 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 SLC14A1Q13336 389 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 SLC29A2Q14542 456 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 TRIM71Q2Q1W2 868 aaKnown RBP4.06□□□□□ -1.76
TRAV40-201ENST00000390467 ZNF260Q3ZCT1 412 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 RNF220Q5VTB9 566 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 C16orf52Q8NHV5 167 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 EDC3Q96F86 508 aaKnown RBP4.06□□□□□ -1.76
TRAV40-201ENST00000390467 WACQ9BTA9 647 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 LRRC27Q9C0I9 530 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 MGAT4CQ9UBM8 478 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 DKK4Q9UBT3 224 aa4.06□□□□□ -1.76
TRAV40-201ENST00000390467 LY6G6EA0A0G2JKS1 128 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 F8W8V4 182 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 H3BNC9 293 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 TRIM38O00635 465 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 SOCS2O14508 198 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 MAP4K4O95819 1239 aaPredicted RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 ZBED1O96006 694 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 FGBP02675 491 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 CYP19A1P11511 503 aaPredicted RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 PHKG2P15735 406 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 TPH1P17752 444 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 HTR7P34969 479 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 CARSP49589 748 aaKnown RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 YPEL5P62699 121 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 GHRHRQ02643 423 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms