RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ATG4CQ96DT6 458 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 DCUN1D5Q9BTE7 237 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 VPS33BQ9H267 617 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 COPS7BQ9H9Q2 264 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 PCDHAC2Q9Y5I4 1007 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 FAM58BPP0C7Q3 252 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 MIPP30301 263 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 CHRNA5P30532 468 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 PHKA2P46019 1235 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 GTF2BQ00403 316 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 PDK3Q15120 406 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 WRNIP1Q96S55 665 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 SIK2Q9H0K1 926 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 KCNQ5Q9NR82 932 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 LGALS13Q9UHV8 139 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 ABLIM1O14639 778 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 LYNP07948 512 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 GYS1P13807 737 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 CHRNB2P17787 502 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 CATSPER4Q7RTX7 472 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 UNKQ9C0B0 810 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 EFCAB1Q9HAE3 211 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 DRG1Q9Y295 367 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 GAKO14976 1311 aa13.59□□□□□ -0.23
TRAPPC9-201ENST00000389328 TCRBV9S1A1TA0A576 114 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 TMCC1O94876 653 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 SNHG28P0DPA3 235 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 GRK2P25098 689 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 AVPR1AP37288 418 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 CDH8P55286 799 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 GSTA3Q16772 222 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 SYTL5Q8TDW5 730 aaPredicted RBP13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 APOL2Q9BQE5 337 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 STAP1Q9ULZ2 295 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 LTN1O94822 1766 aa13.58□□□□□ -0.23
TRAPPC9-201ENST00000389328 E2F6O75461 281 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 SERPINE1P05121 402 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 RBL1P28749 1068 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NOMO3P69849 1222 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 MPP2Q14168 576 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZSCAN18Q8TBC5 510 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 USP6NLQ92738 828 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 TAS2R1Q9NYW7 299 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 KDELR1P24390 212 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 LPCAT2Q7L5N7 544 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 KYQ8NBH2 561 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM151AQ8WW52 585 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 CNDP1Q96KN2 507 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NR1H4Q96RI1 486 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 hCG_1818297A0A087WSY0 165 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 SYCE1LA8MT33 242 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NPTXRO95502 500 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 MT-CO1P00395 513 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 PAMP19021 973 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 PCYT1AP49585 367 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 CHN2P52757 468 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NCKAP1LP55160 1127 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 C16orf72Q14CZ0 275 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 SETD3Q86TU7 594 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 SNX32Q86XE0 403 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 UNC45BQ8IWX7 931 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 FLAD1Q8NFF5 587 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 CNPY3Q9BT09 278 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NRDE2Q9H7Z3 1164 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 MAN1C1Q9NR34 630 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 STK32BQ9NY57 414 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 SNX5Q9Y5X3 404 aa13.58□□□□□ -0.24
TRAPPC9-201ENST00000389328 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM155BO75949 473 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMED10P49755 219 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SULT1E1P49888 294 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 HIRAP54198 1017 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 ADARP55265 1226 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 GOLGA7BQ2TAP0 167 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SEL1L3Q68CR1 1132 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms