RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CDO1Q16878 200 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 CES4AQ5XG92 561 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 NIPA2Q8N8Q9 360 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 KCTD6Q8NC69 237 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 SKA1Q96BD8 255 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 CFAP36Q96G28 342 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 CCDC195A0A1B0GUA6 201 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 TM9SF1O15321 606 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 ERBB2P04626 1255 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 GRIK3Q13003 919 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 SPATA18Q8TC71 538 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 NMUR2Q9GZQ4 415 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 VPS11Q9H270 941 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 SAR1AQ9NR31 198 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 HBP1O60381 514 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 POLR2BP30876 1174 aaKnown RBP16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 DCLRE1BQ9H816 532 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 TAS2R1Q9NYW7 299 aa16.94■□□□□ 0.3
NKX3-1-201ENST00000380871 CCDC22O60826 627 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 ADORA2AP29274 412 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 MIPP30301 263 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 RGS7P49802 495 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 DPYSL3Q14195 570 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 PRKD1Q15139 912 aaPredicted RBP16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 CCDC6Q16204 474 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 DPP9Q86TI2 863 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 ERAP1Q9NZ08 941 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 MARCOQ9UEW3 520 aaPredicted RBP16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 CXorf49A8MYA2 514 aaPredicted RBP16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 UGT1A9O60656 530 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 LGALS2P05162 132 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 NEK3P51956 506 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 GLRA4Q5JXX5 417 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 CCDC62Q6P9F0 684 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 C2orf40Q9H1Z8 148 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 UGT1A7Q9HAW7 530 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 UGT1A10Q9HAW8 530 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 UGT1A8Q9HAW9 530 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 HES2Q9Y543 173 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 WASF2Q9Y6W5 498 aa16.93■□□□□ 0.3
NKX3-1-201ENST00000380871 CYB561D2O14569 222 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 CAPN9O14815 690 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 TBX10O75333 385 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 EIF4BP23588 611 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 YY1P25490 414 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 CDK16Q00536 496 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 SNX30Q5VWJ9 437 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 SH2D5Q6ZV89 423 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 POLNQ7Z5Q5 900 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 CTAGE3PQ8IX95 158 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 NSL1Q96IY1 281 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 CYTH2Q99418 400 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 XYLT2Q9H1B5 865 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 EVPLQ92817 2033 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 M0QYV0 167 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 LIN7AO14910 233 aaPredicted RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 NVLO15381 856 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 INHBAP08476 426 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 DHRS4L1P0CG22 281 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 KITP10721 976 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 AMPD1P23109 780 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 MBTD1Q05BQ5 628 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 BMPR2Q13873 1038 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 VPS52Q8N1B4 723 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 MCUR1Q96AQ8 359 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 APOPT1Q96IL0 206 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ZNF333Q96JL9 665 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 CXCL16Q9H2A7 254 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 PPCSQ9HAB8 311 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 SIX4Q9UIU6 781 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 SIGLEC16A6NMB1 481 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 E7ENQ6 273 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 FCHO1O14526 889 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 AMHR2Q16671 573 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 NBPF20Q3BBV1 942 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 HSF5Q4G112 596 aaPredicted RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 PRAMEF19Q5SWL8 479 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 C1orf228Q6PIY5 440 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 FASTKD5Q7L8L6 764 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ZNF398Q8TD17 642 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ZNF483Q8TF39 744 aaPredicted RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
NKX3-1-201ENST00000380871 ABLIM1O14639 778 aa16.91■□□□□ 0.3
NKX3-1-201ENST00000380871 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
NKX3-1-201ENST00000380871 KRT7P08729 469 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms