RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 STAP1Q9ULZ2 295 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 NCAPHQ15003 741 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 TTC29Q8NA56 475 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 RIN3Q8TB24 985 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 CINPQ9BW66 212 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PCDHGA10Q9Y5H3 936 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SMNDC1O75940 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PRKCBP05771 671 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 CDC16Q13042 620 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 TMEM35BQ8NCS4 154 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF556Q9HAH1 456 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 TMBIM4Q9HC24 238 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 DBR1Q9UK59 544 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF197O14709 1029 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 LARGE1O95461 756 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SLC1A1P43005 524 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PLA2G4FQ68DD2 849 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 PGBD2Q6P3X8 592 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 DDX47Q9H0S4 455 aaKnown RBP11.12□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF222Q9UK12 451 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
CLCN4-202ENST00000380833 CDH16O75309 829 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 GGPS1O95749 300 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 GDI2P50395 445 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 SERHL2Q9H4I8 314 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 SERHLQ9NQF3 203 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 TDP2O95551 362 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 AVPR1AP37288 418 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 GJA9P57773 515 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 COPZ1P61923 177 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 NAT14Q8WUY8 206 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FAM167AQ96KS9 214 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 MAGEB5Q9BZ81 275 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 XKR8Q9H6D3 395 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DPPA5A6NC42 116 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 F5H6K3 240 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 LAD1O00515 517 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 MAP3K6O95382 1288 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FYNP06241 537 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 KLRC3Q07444 240 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 ZSWIM7Q19AV6 140 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 HES6Q96HZ4 224 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 ZC3H7BQ9UGR2 993 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PHTF1Q9UMS5 762 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 NLRP1Q9C000 1473 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DGKIO75912 1065 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 HIST1H2AGP0C0S8 130 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 HIST1H2ADP20671 130 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PTDSS1P48651 473 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 NCALDP61601 193 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 CDK17Q00537 523 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 TXNRD1Q16881 649 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 RNF220Q5VTB9 566 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 UTS2BQ765I0 119 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DCAF4Q8WV16 495 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 HIST1H2AHQ96KK5 128 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 HIST1H2AJQ99878 128 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 H2AFJQ9BTM1 129 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 CHORDC1Q9UHD1 332 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FADS3Q9Y5Q0 445 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 CYB5R4Q7L1T6 521 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DGKHQ86XP1 1220 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 OR8H1Q8NGG4 311 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PSMA8Q8TAA3 256 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PRCCQ92733 491 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 TRPC5OSA6NMA1 111 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 TPPPO94811 219 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FKBP9O95302 570 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 ITGA4P13612 1032 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 EIF4BP23588 611 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PSMB9P28065 219 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 PDK3Q15120 406 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 GARNL3Q5VVW2 1013 aa11.11□□□□□ -0.63
CLCN4-202ENST00000380833 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
CLCN4-202ENST00000380833 FKBP9P1Q75LS8 142 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms