RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 DIS3LQ8TF46 1054 aaKnown RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 NDUFA13Q9P0J0 144 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 SEPT3Q9UH03 358 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 CEP152O94986 1710 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 JCHAINP01591 159 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 CPA3P15088 417 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 SARSP49591 514 aaKnown RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 PRIM2P49643 509 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 NT5DC1Q5TFE4 455 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 PLEKHM3Q6ZWE6 761 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 ADGRA1Q86SQ6 560 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
COL2A1-202ENST00000380518 TADA1Q96BN2 335 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM169Q96HH4 297 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 SEMA4AQ9H3S1 761 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 ANKZF1Q9H8Y5 726 aa16.56■□□□□ 0.24
COL2A1-202ENST00000380518 F8W810 466 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 NCAM2O15394 837 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 ASS1P00966 412 aaKnown RBP16.55■□□□□ 0.24
COL2A1-202ENST00000380518 CSE1LP55060 971 aaKnown RBP16.55■□□□□ 0.24
COL2A1-202ENST00000380518 MGAT5Q09328 741 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 CCDC60Q8IWA6 550 aaPredicted RBP16.55■□□□□ 0.24
COL2A1-202ENST00000380518 ZCWPW1Q9H0M4 648 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 IMPAD1Q9NX62 359 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 AP5Z1O43299 807 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 YY1P25490 414 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 GLRBP48167 497 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 CHRNB3Q05901 458 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 SYTL2Q9HCH5 934 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
COL2A1-202ENST00000380518 GRIN3BO60391 1043 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 MMP14P50281 582 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 PSMC6P62333 389 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 BST2Q10589 180 aaKnown RBP16.55■□□□□ 0.24
COL2A1-202ENST00000380518 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 DDI1Q8WTU0 396 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 TAGLN3Q9UI15 199 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 H7C4K7 107 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 LHX1P48742 406 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 ARL4DP49703 201 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 GTF2A2P52657 109 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 ARHGAP15Q53QZ3 475 aa16.55■□□□□ 0.24
COL2A1-202ENST00000380518 GSNP06396 782 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 PEX5P50542 639 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 RASA2Q15283 850 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 MTDHQ86UE4 582 aaKnown RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 PGBD3Q8N328 593 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF786Q8N393 782 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 HIC2Q96JB3 615 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TBCBQ99426 244 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM245Q9H330 911 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 CD248Q9HCU0 757 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TUBGCP4Q9UGJ1 667 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 DSEQ9UL01 958 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 CES2O00748 559 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 GYS1P13807 737 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 DDX39BQ13838 428 aaKnown RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM132BQ14DG7 1078 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 ADRM1Q16186 407 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 ZCWPW2Q504Y3 356 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 VCPIP1Q96JH7 1222 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 CNBD2Q96M20 576 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 APOL2Q9BQE5 337 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 H3BQF6 201 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 LRG1P02750 347 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 RPLP2P05387 115 aaKnown RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 RAP1GAPP47736 663 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 RARRES1P49788 294 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 OXCT1P55809 520 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 NUP107P57740 925 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TP53BP2Q13625 1128 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM106CQ9BVX2 250 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 TMEM120AQ9BXJ8 343 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 AP4S1Q9Y587 144 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 VTNP04004 478 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 CCDC159P0C7I6 412 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 ALOX15P16050 662 aaPredicted RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 MAPK1P28482 360 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 RPL10AP62906 217 aaKnown RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 GCNT1Q02742 428 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 FBXO16Q8IX29 292 aaPredicted RBP16.54■□□□□ 0.24
COL2A1-202ENST00000380518 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
COL2A1-202ENST00000380518 THP07101 528 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF23P17027 643 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 SLC5A5Q92911 643 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 RMND5AQ9H871 391 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 CYP4F12Q9HCS2 524 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 DOLKQ9UPQ8 538 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 CRTAMO95727 393 aa16.53■□□□□ 0.24
COL2A1-202ENST00000380518 EGFRP00533 1210 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms