RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ALKQ9UM73 1620 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAM20BO75063 409 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CYP19A1P11511 503 aaPredicted RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 NR1H2P55055 460 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 LRMDAQ9H2I8 198 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 TULP2O00295 520 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CDK7P50613 346 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 C1DQ13901 141 aaKnown RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 DPY19L2Q6NUT2 758 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 ELMSAN1Q6PJG2 1045 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 NOL6Q9H6R4 1146 aaKnown RBP17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 RMI1Q9H9A7 625 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 ATXN10Q9UBB4 475 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 SNX9Q9Y5X1 595 aa17.63■□□□□ 0.41
COL4A3BP-203ENST00000380494 CBX6O95503 412 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAM45BPQ6NSW5 357 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 RORBQ92753 470 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZBED2Q9BTP6 218 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 RNF112Q9ULX5 631 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 PRG3Q9Y2Y8 225 aaPredicted RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TNS3Q68CZ2 1445 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 GUCA1CO95843 209 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 RPL5P46777 297 aaKnown RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 CNGA2Q16280 664 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 ATP6AP1LQ52LC2 224 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TCHHL1Q5QJ38 904 aaPredicted RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 DCUN1D5Q9BTE7 237 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 SYNDIG1LA6NDD5 238 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 SNAP23O00161 211 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 PSMB9P28065 219 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TALDO1P37837 337 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 RPL10AP62906 217 aaKnown RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 ITGA9Q13797 1035 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 ELMOD1Q8N336 334 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 FNIP1Q8TF40 1166 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 PCDHA3Q9Y5H8 950 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 MAGEB16A2A368 324 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TBC1D12O60347 775 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 IFNA14P01570 189 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 MGAT5Q09328 741 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRAF3Q13114 568 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 DDR2Q16832 855 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 MRNIPQ6NTE8 343 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMC2Q8TDI7 906 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 CLEC4MQ9H2X3 399 aaPredicted RBP17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 STK39Q9UEW8 545 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 SFMBT1Q9UHJ3 866 aa17.62■□□□□ 0.41
COL4A3BP-203ENST00000380494 MAFGO15525 162 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KRT6BP04259 564 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TKTP29401 623 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KRT6CP48668 564 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CACNB3P54284 484 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CYP51A1Q16850 503 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 PTRHD1Q6GMV3 140 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 SPATA2LQ8IUW3 424 aaPredicted RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 USP13Q92995 863 aaPredicted RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 PRRG3Q9BZD7 231 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 GRIP2Q9C0E4 1043 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 RSL24D1Q9UHA3 163 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 MEI4A8MW99 385 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMEM26Q6ZUK4 368 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KRT73Q86Y46 540 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 EID3Q8N140 333 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZCCHC9Q8N567 271 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 PPP1R10Q96QC0 940 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 LATS2Q9NRM7 1088 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 ENOPH1Q9UHY7 261 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KIAA1257Q9ULG3 409 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 PEX1O43933 1283 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TSC22D2O75157 780 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 LDLRP01130 860 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 ITGA4P13612 1032 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 RFX5P48382 616 aaPredicted RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 IL5RAQ01344 420 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 SV2CQ496J9 727 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRIQKQ629K1 86 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 STRA8Q7Z7C7 330 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CYLDQ9NQC7 956 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 RAD17O75943 681 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 AVPR1AP37288 418 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CCT8P50990 548 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 EPS8Q12929 822 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 NT5DC3Q86UY8 548 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 AGXT2Q9BYV1 514 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TK2O00142 265 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 VPS4BO75351 444 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 CCDC130P13994 396 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 RASA1P20936 1047 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms