RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 GRIN3AQ8TCU5 1115 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 CEP63Q96MT8 703 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 HAUS8Q9BT25 410 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 TSSK1BQ9BXA7 367 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 FKBP14Q9NWM8 211 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 TBC1D14Q9P2M4 693 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 PPARGC1AQ9UBK2 798 aaKnown RBP11.23□□□□□ -0.61
ITSN1-201ENST00000379960 A0A1W2PPM1 405 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 TRAF5O00463 557 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 KRT4P19013 534 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 CTNNA2P26232 953 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 PRELPP51888 382 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 STAT2P52630 851 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 ITGA8P53708 1063 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 KRT17Q04695 432 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 PLEKHA7Q6IQ23 1121 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 DYMQ7RTS9 669 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 CPSF7Q8N684 471 aaKnown RBP11.23□□□□□ -0.61
ITSN1-201ENST00000379960 C4orf32Q8N8J7 132 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 C12orf43Q96C57 262 aaKnown RBP11.23□□□□□ -0.61
ITSN1-201ENST00000379960 SGF29Q96ES7 293 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 DSEQ9UL01 958 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 COL4A3BPQ9Y5P4 624 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 CORINQ9Y5Q5 1042 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
ITSN1-201ENST00000379960 FAM237BA0A1B0GVD1 139 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ARHGAP33O14559 1287 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 GMNNO75496 209 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CALM1P0DP23 149 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CALM2P0DP24 149 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CALM3P0DP25 149 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 RPA1P27694 616 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 NPEPPSP55786 919 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TPTEP56180 551 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 SLC25A3Q00325 362 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 KRT76Q01546 638 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 GABPAQ06546 454 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 STAT4Q14765 748 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 KYAT3Q6YP21 454 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TBC1D15Q8TC07 691 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 HCAR2Q8TDS4 363 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ISOC1Q96CN7 298 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CRNNQ9UBG3 495 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CFAP99D6REC4 459 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PEX1O43933 1283 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ARL1P40616 181 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 BMXP51813 675 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 IST1P53990 364 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CTAG1AP78358 180 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 IRX4P78413 519 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 USP41Q3LFD5 358 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 OGFRL1Q5TC84 451 aaPredicted RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PRR23CQ6ZRP0 262 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PRPF39Q86UA1 669 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 FERMT1Q9BQL6 677 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 MANSC1Q9H8J5 431 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 GNPTGQ9UJJ9 305 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 AGO2Q9UKV8 859 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 NID2Q14112 1375 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 DLDP09622 509 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 CASP5P51878 434 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 BNIP3Q12983 259 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 HEATR3Q7Z4Q2 680 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 KIAA2013Q8IYS2 634 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TSG101Q99816 390 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 TAGLN3Q9UI15 199 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 RAB26Q9ULW5 256 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ERGIC3Q9Y282 383 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ATP11BQ9Y2G3 1177 aa11.22□□□□□ -0.61
ITSN1-201ENST00000379960 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
ITSN1-201ENST00000379960 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.61
ITSN1-201ENST00000379960 GABBR2O75899 941 aa11.21□□□□□ -0.61
ITSN1-201ENST00000379960 MYO1DO94832 1006 aa11.21□□□□□ -0.61
ITSN1-201ENST00000379960 SLC9A1P19634 815 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms