RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 RXFP1Q9HBX9 757 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 FNIP2Q9P278 1114 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 LZTS1Q9Y250 596 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 RWDD3Q9Y3V2 267 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 NR2E3Q9Y5X4 410 aa12.56□□□□□ -0.4
EXOSC9-202ENST00000379663 LINC01553A4QN01 128 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 YJEFN3A6XGL0 299 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 E7ENQ6 273 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 USP17L7P0C7H9 530 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 SDC4P31431 198 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 OR1D2P34982 312 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 MATKP42679 507 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 RWDD2BP57060 319 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 CREMQ03060 361 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 KRT17Q04695 432 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 CKAP4Q07065 602 aaKnown RBP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 RAB33AQ14088 237 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 CYP4V2Q6ZWL3 525 aaPredicted RBP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 MYRIPQ8NFW9 859 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 CAPZA3Q96KX2 299 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 POPDC2Q9HBU9 364 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 IRAK3Q9Y616 596 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 MYO7AQ13402 2215 aa12.55□□□□□ -0.4
EXOSC9-202ENST00000379663 DOCK6Q96HP0 2047 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 C2CD2LO14523 706 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 ENDOD1O94919 500 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 LTFP02788 710 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 ATF2P15336 505 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 ATF6P18850 670 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 IL1R2P27930 398 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 NOS2P35228 1153 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 BMPR1AP36894 532 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 GPR15P49685 360 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 TERF1P54274 439 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 ARPP19P56211 112 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 HDAC4P56524 1084 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 RNASE9P60153 205 aaKnown RBP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 DUSP4Q13115 394 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SHHQ15465 462 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 DDR2Q16832 855 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SLC25A52Q3SY17 297 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SH3PXD2AQ5TCZ1 1133 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 STRADAQ7RTN6 431 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 DEFB106AQ8N104 65 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 NPY6RQ99463 290 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 MRPL17Q9NRX2 175 aaKnown RBP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
EXOSC9-202ENST00000379663 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 CTIFO43310 598 aaKnown RBP12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 TADA3O75528 432 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 RNF8O76064 485 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 PYGMP11217 842 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 MIPP30301 263 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 RAB6CQ53S08 254 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 FAM172AQ8WUF8 416 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 PEBP4Q96S96 227 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 GDF15Q99988 308 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 RAB6CQ9H0N0 254 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 SMARCAL1Q9NZC9 954 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 SCML2Q9UQR0 700 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 SLC27A5Q9Y2P5 690 aa12.53□□□□□ -0.4
EXOSC9-202ENST00000379663 CTAGE15A4D2H0 777 aa12.52□□□□□ -0.4
EXOSC9-202ENST00000379663 EFCAB8A8MWE9 144 aa12.52□□□□□ -0.4
EXOSC9-202ENST00000379663 TEX28O15482 410 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms