RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TUSC3Q13454 348 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 RAB6CQ53S08 254 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 PIGZQ86VD9 579 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 CMASQ8NFW8 434 aaPredicted RBP20.3■□□□□ 0.84
SSU72-204ENST00000378726 MED10Q9BTT4 135 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 RAB6CQ9H0N0 254 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 CRTAC1Q9NQ79 661 aa20.3■□□□□ 0.84
SSU72-204ENST00000378726 KRT17Q04695 432 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 HSPH1Q92598 858 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 CCDC114Q96M63 670 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 SYT15Q9BQS2 421 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 SLC40A1Q9NP59 571 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 KLC4Q9NSK0 619 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 GRHL1Q9NZI5 618 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 GOLGA6L7A0A1B0GV03 622 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 BEST1O76090 585 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 NPR3P17342 541 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 DRD4P21917 467 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 BRCC3P46736 316 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 ZDHHC24Q6UX98 284 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 SYDE1Q6ZW31 735 aaPredicted RBP20.29■□□□□ 0.84
SSU72-204ENST00000378726 FBXO25Q8TCJ0 367 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 CD248Q9HCU0 757 aa20.29■□□□□ 0.84
SSU72-204ENST00000378726 MYBPHLA2RUH7 354 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 DPYSL4O14531 572 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 CD48P09326 243 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 GBP1P32455 592 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 PMS2P54278 862 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 EIF3BP55884 814 aaKnown RBP20.28■□□□□ 0.84
SSU72-204ENST00000378726 FAM189BP81408 668 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 PLCB3Q01970 1234 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 ANKRD20A8PQ5CZ79 823 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 SCYL2Q6P3W7 929 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 LRRC8DQ7L1W4 858 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 CACNA2D3Q8IZS8 1091 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 HASPINQ8TF76 798 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 PEBP4Q96S96 227 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 NGRNQ9NPE2 291 aaKnown RBP20.28■□□□□ 0.84
SSU72-204ENST00000378726 EFR3BQ9Y2G0 817 aa20.28■□□□□ 0.84
SSU72-204ENST00000378726 PRPSAP2O60256 369 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 GAS8O95995 478 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 SELPP16109 830 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 GLB1LQ6UWU2 654 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 SLC26A9Q7LBE3 791 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 FAM172AQ8WUF8 416 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 LINC01599Q8WXQ3 324 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 UROC1Q96N76 676 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 ACTR5Q9H9F9 607 aaPredicted RBP20.27■□□□□ 0.84
SSU72-204ENST00000378726 CDH9Q9ULB4 789 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 LIASO43766 372 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 ODC1P11926 461 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 SCNN1AP37088 669 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 TRIP13Q15645 432 aaPredicted RBP20.27■□□□□ 0.84
SSU72-204ENST00000378726 TAZQ16635 292 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 UBAP2Q5T6F2 1119 aaKnown RBP20.27■□□□□ 0.84
SSU72-204ENST00000378726 ERMARDQ5T6L9 678 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 DCLRE1AQ6PJP8 1040 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 CLEC20AQ6ZU45 233 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 CPLX4Q7Z7G2 160 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 DEFB118Q96PH6 123 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
SSU72-204ENST00000378726 CNOT10Q9H9A5 744 aaKnown RBP20.27■□□□□ 0.84
SSU72-204ENST00000378726 ASIC3Q9UHC3 531 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 DNPEPQ9ULA0 475 aa20.27■□□□□ 0.84
SSU72-204ENST00000378726 INPPL1O15357 1258 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 CAPN15O75808 1086 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 FAM200BP0CF97 657 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 DESP17661 470 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 MAP3K7CLP57077 242 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 ARCQ7LC44 396 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 METTL23Q86XA0 190 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 HAUS1Q96CS2 278 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 PCED1BQ96HM7 432 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 PABPC3Q9H361 631 aaKnown RBP20.26■□□□□ 0.83
SSU72-204ENST00000378726 CST8O60676 142 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 NUDT17P0C025 328 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 PCSK1P29120 753 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 DYNLT1P63172 113 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 ADIGQ0VDE8 80 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 PTK6Q13882 451 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 MTFR1Q15390 333 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 BOLA3Q53S33 107 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 EFHC1Q5JVL4 640 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 GKAP1Q5VSY0 366 aaPredicted RBP20.26■□□□□ 0.83
SSU72-204ENST00000378726 DRICH1Q6PGQ1 229 aaPredicted RBP20.26■□□□□ 0.83
SSU72-204ENST00000378726 CYP4V2Q6ZWL3 525 aaPredicted RBP20.26■□□□□ 0.83
SSU72-204ENST00000378726 GSTA5Q7RTV2 222 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 HOOK3Q86VS8 718 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 FAM126BQ8IXS8 530 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 KCTD13Q8WZ19 329 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 NDRG1Q92597 394 aaKnown RBP20.26■□□□□ 0.83
SSU72-204ENST00000378726 FTHL17Q9BXU8 183 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 CALN1Q9BXU9 219 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 SEZ6LQ9BYH1 1024 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 LRRC4Q9HBW1 653 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 ZNF148Q9UQR1 794 aa20.26■□□□□ 0.83
SSU72-204ENST00000378726 PAX3P23760 479 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CDH6P55285 790 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms