RNA–Protein interactions for RNA: ENST00000378539.5

PLXNA4-203, Transcript of plexin A4, humanhuman

TSL 1 (best) BASIC

Gene PLXNA4, Length 2,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4-203ENST00000378539 C8orf48Q96LL4 319 aa13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 SEPT5Q99719 369 aaPredicted RBP13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 POPDC2Q9HBU9 364 aa13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 KLHL11Q9NVR0 708 aa13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 TTC7AQ9ULT0 858 aaPredicted RBP13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 USP3Q9Y6I4 520 aa13.74□□□□□ -0.21
PLXNA4-203ENST00000378539 VNN2O95498 520 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 LTFP02788 710 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 KRT7P08729 469 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 PCK1P35558 622 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 GPR15P49685 360 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ITIH3Q06033 890 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SMC1AQ14683 1233 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 DCAF6Q58WW2 860 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SDHAF4Q5VUM1 108 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 PM20D1Q6GTS8 502 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 BHLHA9Q7RTU4 235 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SCML4Q8N228 414 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 NOA1Q8NC60 698 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 IRGQQ8WZA9 623 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 UBXN4Q92575 508 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 CLSTN3Q9BQT9 956 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 DDX23Q9BUQ8 820 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 USP18Q9UMW8 372 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 CAPN9O14815 690 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SOAT2O75908 522 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 KRT1P04264 644 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 IL1R2P27930 398 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 DUSP4Q13115 394 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 CLUL1Q15846 466 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 STKLD1Q8NE28 680 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 EXD1Q8NHP7 514 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 ACSF2Q96CM8 615 aaPredicted RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 SLC2A13Q96QE2 648 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 C11orf84Q9BUA3 381 aaPredicted RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 STAP1Q9ULZ2 295 aa13.73□□□□□ -0.21
PLXNA4-203ENST00000378539 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 HAPLN1P10915 354 aaPredicted RBP13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 NOS2P35228 1153 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 SULT1E1P49888 294 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 HDAC4P56524 1084 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 NUP93Q8N1F7 819 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 KLHL23Q8NBE8 558 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 RBM41Q96IZ5 413 aaKnown RBP13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 TBCBQ99426 244 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 CHD9Q3L8U1 2897 aa13.72□□□□□ -0.21
PLXNA4-203ENST00000378539 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 KRIT1O00522 736 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 FYNP06241 537 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 NCAM1P13591 858 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 CTNNB1P35222 781 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 C9orf50Q5SZB4 431 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 SYPL2Q5VXT5 272 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 SCYL2Q6P3W7 929 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 PEBP4Q96S96 227 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 AP1M1Q9BXS5 423 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 ZBP1Q9H171 429 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.21
PLXNA4-203ENST00000378539 PI4K2BG5E9Z4 385 aa13.71□□□□□ -0.22
PLXNA4-203ENST00000378539 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.22
PLXNA4-203ENST00000378539 CA8P35219 290 aa13.71□□□□□ -0.22
PLXNA4-203ENST00000378539 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.22
PLXNA4-203ENST00000378539 RPL10AP62906 217 aaKnown RBP13.71□□□□□ -0.22
PLXNA4-203ENST00000378539 TUBB4BP68371 445 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms