RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 ARHGAP17Q68EM7 881 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 PIGZQ86VD9 579 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 ARHGEF19Q8IW93 802 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 MLKLQ8NB16 471 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 ANKRD52Q8NB46 1076 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 UBA3Q8TBC4 463 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 CD101Q93033 1021 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 PRMT8Q9NR22 394 aaPredicted RBP12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 IL37Q9NZH6 218 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 DACH1Q9UI36 760 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 FAM92AA1XBS5 289 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 PROB1E7EW31 1015 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 RNF40O75150 1001 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 RALAP11233 206 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 VDRP11473 427 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 KRT5P13647 590 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 CCINQ13939 588 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 GAS6Q14393 721 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 TMEM196Q5HYL7 178 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 TADA2BQ86TJ2 420 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 TTC30AQ86WT1 665 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 SPEM1Q8N4L4 309 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 RBBP8NLQ8NC74 664 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 CRACR2AQ9BSW2 395 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 LRRC4Q9HBW1 653 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 OSER1Q9NX31 292 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 ZSCAN32Q9NX65 697 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 TBC1D14Q9P2M4 693 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 RASAL2Q9UJF2 1139 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 LSM7Q9UK45 103 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 CACNA1HO95180 2353 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 CACNA1IQ9P0X4 2223 aa12.18□□□□□ -0.46
SMARCE1-203ENST00000377808 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 M0QYV0 167 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 TULP2O00295 520 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 PMM2O15305 246 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 ADH1CP00326 375 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 CALCAP01258 141 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 LMNAP02545 664 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 CYP17A1P05093 508 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 HMBSP08397 361 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 ADH5P11766 374 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 DRD1P21728 446 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 TKTL1P51854 596 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 SEC13P55735 322 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 MARSP56192 900 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 PDE4CQ08493 712 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 DHCR24Q15392 516 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 MIB1Q86YT6 1006 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 BBS7Q8IWZ6 715 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 SIX6OS1Q8N1H7 587 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 SYNPOQ8N3V7 929 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 UBR7Q8N806 425 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 LMO3Q8TAP4 145 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 FBRSL1Q9HCM7 1045 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 PCDHGA2Q9Y5H1 932 aa12.17□□□□□ -0.46
SMARCE1-203ENST00000377808 PIK3R2O00459 728 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 PAEPP09466 180 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 LCP1P13796 627 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 USP8P40818 1118 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 PSEN1P49768 467 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 RGS7P49802 495 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 NRLP54845 237 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 GCNT1Q02742 428 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 KDSRQ06136 332 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 ADIGQ0VDE8 80 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 EFEMP1Q12805 493 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 ANO4Q32M45 955 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 BTBD8Q5XKL5 378 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 RPLP0P6Q8NHW5 317 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms