RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 KCTD10Q9H3F6 313 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 MMRN2Q9H8L6 949 aa20.33■□□□□ 0.84
CBWD3-204ENST00000377349 SGK1O00141 431 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 SLC9A3R1O14745 358 aaPredicted RBP20.32■□□□□ 0.84
CBWD3-204ENST00000377349 COCHO43405 550 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 KIF20AO95235 890 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 KAT7O95251 611 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 MBL2P11226 248 aaPredicted RBP20.32■□□□□ 0.84
CBWD3-204ENST00000377349 ATICP31939 592 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 CDH8P55286 799 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 ZNF667Q5HYK9 610 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 EMC10Q5UCC4 262 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 TXNDC5Q8NBS9 432 aaKnown RBP20.32■□□□□ 0.84
CBWD3-204ENST00000377349 SCAMP5Q8TAC9 235 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 PARD3BQ8TEW8 1205 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 IL37Q9NZH6 218 aa20.32■□□□□ 0.84
CBWD3-204ENST00000377349 C4orf47A7E2U8 309 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PATE3B3GLJ2 98 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PDXKO00764 312 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 ZNF202O95125 648 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 YWHAQP27348 245 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 CLDN10P78369 228 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 SNX30Q5VWJ9 437 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PSAPL1Q6NUJ1 521 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 FAM35AQ86V20 835 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 C11orf74Q86VG3 221 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 ETFBKMTQ8IXQ9 262 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 OVCA2Q8WZ82 227 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 WBP2Q969T9 261 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PNKPQ96T60 521 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 ZDHHC4Q9NPG8 344 aa20.31■□□□□ 0.84
CBWD3-204ENST00000377349 PCDH15Q96QU1 1955 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 A0A1W2PQ27 194 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 A0A1W2PQ64 194 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 A0A1W2PQD8 194 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 E2F8A0AVK6 867 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 FAM92AA1XBS5 289 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 CDX4O14627 284 aaPredicted RBP20.3■□□□□ 0.84
CBWD3-204ENST00000377349 GIPC1O14908 333 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 ADAM23O75077 832 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 RTN3O95197 1032 aaPredicted RBP20.3■□□□□ 0.84
CBWD3-204ENST00000377349 VNN1O95497 513 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 KLF8O95600 359 aaPredicted RBP20.3■□□□□ 0.84
CBWD3-204ENST00000377349 ZDHHC11BP0C7U3 371 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 ADH5P11766 374 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 NR2F2P24468 414 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 TIE1P35590 1138 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 P2RY2P41231 377 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 PGFP49763 221 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 AP3M2P53677 418 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 DPYDQ12882 1025 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 ORC1Q13415 861 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 LY6G5CQ5SRR4 150 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 DDX42Q86XP3 938 aaKnown RBP eCLIP20.3■□□□□ 0.84
CBWD3-204ENST00000377349 FRMD1Q8N878 549 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 RLN3Q8WXF3 142 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 FBXO32Q969P5 355 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CBWD3-204ENST00000377349 ADH1CP00326 375 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 SLC5A3P53794 718 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 KDSRQ06136 332 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 SLC9A9Q8IVB4 645 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
CBWD3-204ENST00000377349 PDZD8Q8NEN9 1154 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 ZMIZ2Q8NF64 920 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 DUSP9Q99956 384 aaKnown RBP20.29■□□□□ 0.84
CBWD3-204ENST00000377349 CCSER2Q9H7U1 834 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 TBC1D14Q9P2M4 693 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 CHORDC1Q9UHD1 332 aaPredicted RBP20.29■□□□□ 0.84
CBWD3-204ENST00000377349 MBD1Q9UIS9 605 aaPredicted RBP20.29■□□□□ 0.84
CBWD3-204ENST00000377349 HCN2Q9UL51 889 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 DMXL2Q8TDJ6 3036 aa20.29■□□□□ 0.84
CBWD3-204ENST00000377349 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 C4BPAP04003 597 aaKnown RBP20.28■□□□□ 0.84
CBWD3-204ENST00000377349 APODP05090 189 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 TRIM49P0CI25 452 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 TRIM49CP0CI26 452 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 P4HA1P13674 534 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 GRIA2P42262 883 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 TUBP50607 506 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 HSF5Q4G112 596 aaPredicted RBP20.28■□□□□ 0.84
CBWD3-204ENST00000377349 CYP2U1Q7Z449 544 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 FUKQ8N0W3 1084 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 GMIPQ9P107 970 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 WASF3Q9UPY6 502 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 ZFYVE26Q68DK2 2539 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 CACNA1GO43497 2377 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 ATP8B3O60423 1300 aa20.28■□□□□ 0.84
CBWD3-204ENST00000377349 FAM237AA0A1B0GTK4 181 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 KHNYNO15037 678 aaKnown RBP20.27■□□□□ 0.84
CBWD3-204ENST00000377349 HOXC11O43248 304 aaPredicted RBP20.27■□□□□ 0.84
CBWD3-204ENST00000377349 GREM1O60565 184 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 BEST1O76090 585 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 KRT13P13646 458 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 TNFRSF4P43489 277 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 NOVA1P51513 510 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms