RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 AGAP3Q96P47 875 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 FGFBP2Q9BYJ0 223 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 SLCO1B7G3V0H7 640 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 EXTL3O43909 919 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 H2AFYO75367 372 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 GALNTL6Q49A17 601 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 AASDHQ4L235 1098 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 BOLA3Q53S33 107 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 DDIASQ8IXT1 998 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 BTBD9Q96Q07 612 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 NAT9Q9BTE0 207 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 FHDC1Q9C0D6 1143 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 IL1RL2Q9HB29 575 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 IGSF9BQ9UPX0 1349 aa9.37□□□□□ -0.91
CRNKL1-201ENST00000377327 CLOCKO15516 846 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TCEA3O75764 348 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 GLRA2P23416 452 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CA8P35219 290 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 GCNT1Q02742 428 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TRAF2Q12933 501 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 LDHDQ86WU2 507 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ALLCQ8N6M5 410 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TDRD5Q8NAT2 981 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 VPS50Q96JG6 964 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 SIGLEC1Q9BZZ2 1709 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 EBF3Q9H4W6 596 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 COPG2Q9UBF2 871 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 SLC39A10Q9ULF5 831 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 RPS6KL1Q9Y6S9 549 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 SDR42E2A6NKP2 422 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TRDMT1O14717 391 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 AMPD1P23109 780 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CRKP46108 304 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CLK1P49759 484 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 PKNOX1P55347 436 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ABCE1P61221 599 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 FMO1Q01740 532 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 WASHC5Q12768 1159 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ITPRIPL1Q6GPH6 555 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CCDC103Q8IW40 242 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 MICU2Q8IYU8 434 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 FBXW8Q8N3Y1 598 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ZCCHC7Q8N3Z6 543 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 WRNIP1Q96S55 665 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ZBTB18Q99592 522 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TOPORSQ9NS56 1045 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ETNK2Q9NVF9 386 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 PRR12Q9ULL5 1215 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 PSMD13Q9UNM6 376 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 DLG5Q8TDM6 1919 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ABCC6O95255 1503 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 HEATR9A2RTY3 570 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 SAC3D1A6NKF1 404 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 DLGAP3O95886 979 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 FGRP09769 529 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TSHRP16473 764 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CDH3P22223 829 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ECM1Q16610 540 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 PLA2G4FQ68DD2 849 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 ARCQ7LC44 396 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 C12orf50Q8NA57 414 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 KIF13AQ9H1H9 1805 aa9.36□□□□□ -0.91
CRNKL1-201ENST00000377327 JAM2P57087 298 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 NEDD8Q15843 81 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 SPDYAQ5MJ70 313 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 TTC7BQ86TV6 843 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 BHLHE22Q8NFJ8 381 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 ZSCAN18Q8TBC5 510 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 DIS3LQ8TF46 1054 aaKnown RBP9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 MXRA8Q9BRK3 442 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 NIF3L1Q9GZT8 377 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 GPRC5CQ9NQ84 441 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 EURLQ9NYK6 297 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 SELENONQ9NZV5 590 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 PACSIN3Q9UKS6 424 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 CLRN2A0PK11 232 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 C2orf71A6NGG8 1288 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 SLITRK3O94933 977 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 MAP3K6O95382 1288 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 COX4I1P13073 169 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 SOX11P35716 441 aa9.35□□□□□ -0.91
CRNKL1-201ENST00000377327 GJA8P48165 433 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms