RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 DDX6P26196 483 aaKnown RBP eCLIP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 GJA4P35212 333 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 AVPR1AP37288 418 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 GALK1P51570 392 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 MESP2Q0VG99 397 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 MTF1Q14872 753 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CCDC6Q16204 474 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CCDC73Q6ZRK6 1079 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 PRR23CQ6ZRP0 262 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 KBTBD6Q86V97 674 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 SFTPA1Q8IWL2 248 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 ABCA7Q8IZY2 2146 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 TMEM86AQ8N2M4 240 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 ARL14EPQ8N8R7 260 aaPredicted RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 NOC3LQ8WTT2 800 aaKnown RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 INTS4Q96HW7 963 aaKnown RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 GCNAQ96QF7 691 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 MRPL45Q9BRJ2 306 aaKnown RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 DPEP3Q9H4B8 488 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 SMOC1Q9H4F8 434 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 KIF9Q9HAQ2 790 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 ATXN7L1Q9ULK2 861 aaPredicted RBP10.2□□□□□ -0.78
C9orf85-202ENST00000377027 EXOC7Q9UPT5 735 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 PLXND1Q9Y4D7 1925 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 WNT6Q9Y6F9 365 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 AKAP13Q12802 2813 aa10.2□□□□□ -0.78
C9orf85-202ENST00000377027 CNOT1A5YKK6 2376 aaKnown RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 PRR5-ARHGAP8B1AHC4 643 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SLC30A4O14863 429 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ATXN7O15265 892 aaPredicted RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 STX6O43752 255 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 LRP3O75074 770 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 TMEM191BP0C7N4 346 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 PDCP20941 246 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 WARSP23381 471 aaKnown RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 MAGEA11P43364 429 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 RAP1GAPP47736 663 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 RBP5P82980 135 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ARHGAP8P85298 464 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ALCAMQ13740 583 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 PPP2R5DQ14738 602 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SF3A2Q15428 464 aaKnown RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 CSRP2Q16527 193 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 CNNM4Q6P4Q7 775 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 LRRC69Q6ZNQ3 347 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SYCP3Q8IZU3 236 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SYNPOQ8N3V7 929 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SPATA18Q8TC71 538 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ZNF507Q8TCN5 953 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SCFD1Q8WVM8 642 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 MRPS31Q92665 395 aaKnown RBP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ELMO3Q96BJ8 720 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ABHD17AQ96GS6 310 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 PCED1BQ96HM7 432 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 FUBP3Q96I24 572 aaKnown RBP eCLIP10.19□□□□□ -0.78
C9orf85-202ENST00000377027 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 SYT15Q9BQS2 421 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 RTKNQ9BST9 563 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 TNMDQ9H2S6 317 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 LINC00597Q9H2U6 94 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 ECT2Q9H8V3 914 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 TRPC7Q9HCX4 862 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 AGPAT3Q9NRZ7 376 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 CACNA1BQ00975 2339 aa10.19□□□□□ -0.78
C9orf85-202ENST00000377027 THADAQ6YHU6 1953 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 TM4SF5O14894 197 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 CLIC2O15247 247 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 EPN2O95208 641 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 OLFM2O95897 454 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 HNRNPLP14866 589 aaKnown RBP eCLIP10.18□□□□□ -0.785e-7■■■□□ 16.2
C9orf85-202ENST00000377027 TCF3P15923 654 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 BDNFP23560 247 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 CNR2P34972 360 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 OPRD1P41143 372 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 LHX1P48742 406 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 RPL10AP62906 217 aaKnown RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 MYL7Q01449 175 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 SRSF11Q05519 484 aaKnown RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 TAF12Q16514 161 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 TRAPPC11Q7Z392 1133 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 SPATA2LQ8IUW3 424 aaPredicted RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 WDR49Q8IV35 697 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 SCN4BQ8IWT1 228 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 SH3RF2Q8TEC5 729 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 GAB3Q8WWW8 586 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
C9orf85-202ENST00000377027 DHX58Q96C10 678 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 HPDLQ96IR7 371 aa10.18□□□□□ -0.78
C9orf85-202ENST00000377027 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms