RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 VRTNQ9H8Y1 702 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 PRMT7Q9NVM4 692 aaPredicted RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 ANK1P16157 1881 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 CFAP69A5D8W1 941 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 E5RJQ4 531 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 YWHAZP63104 245 aaKnown RBP26.33■■□□□ 1.81
C9orf40-201ENST00000376854 Q3C1V9 767 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 SLC26A11Q86WA9 606 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 FBXO16Q8IX29 292 aaPredicted RBP26.33■■□□□ 1.81
C9orf40-201ENST00000376854 MIPEPQ99797 713 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 TMEM120AQ9BXJ8 343 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 KCNK13Q9HB14 408 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 PNPLA8Q9NP80 782 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 DONSONQ9NYP3 566 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 SUFUQ9UMX1 484 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 PAPPA2Q9BXP8 1791 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 E7ENQ6 273 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 TGDSO95455 350 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 TAF11Q15544 211 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 MAP7D3Q8IWC1 876 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 PLD5Q8N7P1 536 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 TTC8Q8TAM2 541 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 ANKRD27Q96NW4 1050 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 SMARCAD1Q9H4L7 1026 aa26.33■■□□□ 1.81
C9orf40-201ENST00000376854 RPL26L1Q9UNX3 145 aaKnown RBP26.33■■□□□ 1.81
C9orf40-201ENST00000376854 MTO1Q9Y2Z2 717 aaKnown RBP26.33■■□□□ 1.81
C9orf40-201ENST00000376854 A0A0G2JLL6 359 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 HBP1O60381 514 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 CCDC22O60826 627 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 FAM155BO75949 473 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 ECM2O94769 699 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 CYP3A5P20815 502 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 GCLCP48506 637 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 NDST1P52848 882 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 PRRT2Q7Z6L0 340 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 CTAGE3PQ8IX95 158 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 ENDOVQ8N8Q3 282 aaKnown RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 TUBB6Q9BUF5 446 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 ARL8BQ9NVJ2 186 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 BARX2Q9UMQ3 279 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 MGAMO43451 1857 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 ENTPD5O75356 428 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 MCF2P10911 925 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 SERPINB3P29508 390 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 CDK16Q00536 496 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 ZBTB16Q05516 673 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 TTC39BQ5VTQ0 682 aaPredicted RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 PPM1NQ8N819 430 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 PTCD3Q96EY7 689 aaKnown RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 IQCGQ9H095 443 aaKnown RBP26.32■■□□□ 1.8
C9orf40-201ENST00000376854 IFT122Q9HBG6 1241 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 CNTN3Q9P232 1028 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 TTLL3Q9Y4R7 772 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 HEY1Q9Y5J3 304 aa26.32■■□□□ 1.8
C9orf40-201ENST00000376854 COPEO14579 308 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 KIF1CO43896 1103 aaKnown RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SERPINB4P48594 390 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SLC26A2P50443 739 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 TNFAIP2Q03169 654 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SCYL2Q6P3W7 929 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SKA1Q96BD8 255 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 ASB7Q9H672 318 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 FBXO6Q9NRD1 293 aaPredicted RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 GPATCH2LQ9NWQ4 482 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 TSPAN16Q9UKR8 245 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 TRIM49D1C9J1S8 452 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 DNAJC6O75061 913 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 DLDP09622 509 aaKnown RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 IL4RP24394 825 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 RBL1P28749 1068 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 PHKA2P46019 1235 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 PDK2Q15119 407 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 FAXCQ5TGI0 409 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 LCLAT1Q6UWP7 414 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SH3TC2Q8TF17 1288 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 NSL1Q96IY1 281 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 SRPK1Q96SB4 655 aaKnown RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 PPP1R16BQ96T49 567 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 BTBD10Q9BSF8 475 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 CADM1Q9BY67 442 aaKnown RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 FRMD8Q9BZ67 464 aaPredicted RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 MIS12Q9H081 205 aa26.31■■□□□ 1.8
C9orf40-201ENST00000376854 ZC3H7BQ9UGR2 993 aaKnown RBP26.31■■□□□ 1.8
C9orf40-201ENST00000376854 H0Y3Z8 333 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 APOL1O14791 398 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 C1QAP02745 245 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 BCAR1P56945 870 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 IGBP1P78318 339 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 SLC10A6Q3KNW5 377 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 CCDC14Q49A88 953 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 RTP4Q96DX8 246 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 CPB2Q96IY4 423 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 NFKBIZQ9BYH8 718 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 PDZD7Q9H5P4 517 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 RBPJLQ9UBG7 517 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 ZBED1O96006 694 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 INCA1Q0VD86 236 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 TMEM132DQ14C87 1099 aa26.3■■□□□ 1.8
C9orf40-201ENST00000376854 NAF1Q96HR8 494 aaKnown RBP26.3■■□□□ 1.8
C9orf40-201ENST00000376854 POPDC2Q9HBU9 364 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms