RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SOWAHAQ2M3V2 549 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 FAM91A1Q658Y4 838 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 DCUN1D2Q6PH85 259 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ANKRD42Q8N9B4 389 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 FAM71DQ8N9W8 422 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 GRAMD1AQ96CP6 724 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 PTCD3Q96EY7 689 aaKnown RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 MCMBPQ9BTE3 642 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 EIF2AQ9BY44 585 aaKnown RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 NSRP1Q9H0G5 558 aaKnown RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 DPEP3Q9H4B8 488 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ECT2Q9H8V3 914 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 DPP3Q9NY33 737 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 SAMD15Q9P1V8 674 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 SLC17A7Q9P2U7 560 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 GGT7Q9UJ14 662 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 PHTF1Q9UMS5 762 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 INO80B-WBP1J3KQ70 363 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 SGK1O00141 431 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 PIAS1O75925 651 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 VIMP08670 466 aaKnown RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 CYP2C8P10632 490 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 GM2AP17900 193 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 TGM2P21980 687 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 PTPN9P43378 593 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 PRKD1Q15139 912 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF410Q86VK4 478 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 UBA3Q8TBC4 463 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 CLEC4CQ8WTT0 213 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 SKA1Q96BD8 255 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF670Q9BS34 389 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 INO80BQ9C086 356 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 KLHL14Q9P2G3 628 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 XPO7Q9UIA9 1087 aaKnown RBP10.01□□□□□ -0.81
TRIM39-202ENST00000376659 CEP350Q5VT06 3117 aa10.01□□□□□ -0.81
TRIM39-202ENST00000376659 ASB14A6NK59 587 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 WFS1O76024 890 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ADORA2AP29274 412 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ADCYAP1R1P41586 468 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 STEAP4Q687X5 459 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ATG14Q6ZNE5 492 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GSTA5Q7RTV2 222 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 RPAINQ86UA6 219 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 C12orf65Q9H3J6 166 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 PLEKHA5Q9HAU0 1116 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GNEQ9Y223 722 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 GOLGA6L7A0A1B0GV03 622 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 CXorf49A8MYA2 514 aaPredicted RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 GOLGA8MH3BSY2 632 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 HAS3O00219 553 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 NOP56O00567 594 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 CAPN15O75808 1086 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ZWINTO95229 277 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 EIF3EP60228 445 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 DYNLT1P63172 113 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GOLGA7BQ2TAP0 167 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 FAM133BQ5BKY9 247 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 CDHR3Q6ZTQ4 885 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 USP50Q70EL3 339 aaPredicted RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 BHLHA9Q7RTU4 235 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 C4orf33Q8N1A6 199 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF513Q8N8E2 541 aaPredicted RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 ATP11CQ8NB49 1132 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 TMEM40Q8WWA1 233 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF75CPQ92670 426 aaPredicted RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 TMEM237Q96Q45 408 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 SNRNP25Q9BV90 132 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 SLC5A4Q9NY91 659 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 LNPEPQ9UIQ6 1025 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF180Q9UJW8 692 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 KIAA1257Q9ULG3 409 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GBF1Q92538 1859 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 KLF11O14901 512 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 TM9SF1O15321 606 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 AVILO75366 819 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 RFPL1O75677 317 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 AMHP03971 560 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 VAV1P15498 845 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 CALRP27797 417 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 CDR1P51861 262 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 RNASELQ05823 741 aaKnown RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 DNAJC3Q13217 504 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GRIK4Q16099 956 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 FAM102AQ5T9C2 384 aaPredicted RBP10□□□□□ -0.81
TRIM39-202ENST00000376659 NCBP2-AS2Q69YL0 99 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 LRRC52Q8N7C0 313 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 QKIQ96PU8 341 aaKnown RBP eCLIP10□□□□□ -0.81
TRIM39-202ENST00000376659 NOD2Q9HC29 1040 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 NEU3Q9UQ49 428 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 MFHAS1Q9Y4C4 1052 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 KIAA1671Q9BY89 1806 aa10□□□□□ -0.81
TRIM39-202ENST00000376659 KBTBD13C9JR72 458 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 I6L893 689 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DNAJC6O75061 913 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms