RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MYL12AP19105 171 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 MYO1HQ8N1T3 1032 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 B3GALNT2Q8NCR0 500 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■□□ 16
VPS13A-204ENST00000376634 TIGD7Q6NT04 549 aaPredicted RBP12.86□□□□□ -0.35
VPS13A-204ENST00000376634 DENND6AQ8IWF6 608 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 A0A1B0GTH6 734 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 HPCAL1P37235 193 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 TRIM49D1C9J1S8 452 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 MACC1Q6ZN28 852 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
VPS13A-204ENST00000376634 LRRC6Q86X45 466 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 SCUBE1Q8IWY4 988 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 PRMT7Q9NVM4 692 aaPredicted RBP12.86□□□□□ -0.35
VPS13A-204ENST00000376634 COMMD8Q9NX08 183 aa12.86□□□□□ -0.35
VPS13A-204ENST00000376634 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.86□□□□□ -0.35
VPS13A-204ENST00000376634 EVPLQ92817 2033 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 NPTXRO95502 500 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 CCT8P50990 548 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 ECDO95905 644 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 ACADMP11310 421 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SERPINH1P50454 418 aaKnown RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 FRMD8P1Q9BZ68 369 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 RXRGP48443 463 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 HLFQ16534 295 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TFE3P19532 575 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 KRT74Q7RTS7 529 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SNX13Q9Y5W8 968 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TPST1O60507 370 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 ATG16L2Q8NAA4 619 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SLC22A9Q8IVM8 553 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 MB21D2Q8IYB1 491 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 MTM1Q13496 603 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 FAM118BQ9BPY3 351 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 EFCAB1Q9HAE3 211 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 IARS2Q9NSE4 1012 aaKnown RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TRPC4Q9UBN4 977 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 DSEQ9UL01 958 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 CST8O60676 142 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 PLA2G6O60733 806 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 CRTAMO95727 393 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 ENO2P09104 434 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 COMTP21964 271 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 GPR1P46091 355 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 SKP1P63208 163 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 TAF1CQ15572 869 aaPredicted RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 MOV10L1Q9BXT6 1211 aaKnown RBP12.85□□□□□ -0.35
VPS13A-204ENST00000376634 WHRNQ9P202 907 aa12.85□□□□□ -0.35
VPS13A-204ENST00000376634 IFRD1O00458 451 aaPredicted RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 PSMD14O00487 310 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CNPP09543 421 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 TRIM32Q13049 653 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 EPHA7Q15375 998 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 WDR41Q9HAD4 459 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ERN1O75460 977 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 PLIN5Q00G26 463 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 PPP1R10Q96QC0 940 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 KLHL1Q9NR64 748 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CPA2P48052 419 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 NME5P56597 212 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 PEG10Q86TG7 708 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 PRMT9Q6P2P2 845 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 TDRD5Q8NAT2 981 aaKnown RBP12.84□□□□□ -0.35
VPS13A-204ENST00000376634 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ROGDIQ9GZN7 287 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 ELOVL6Q9H5J4 265 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 KRT6AP02538 564 aa12.84□□□□□ -0.35
VPS13A-204ENST00000376634 UQCRBP14927 111 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms