RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 VAMP7P51809 220 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 ENPEPQ07075 957 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 CRY1Q16526 586 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 ANO6Q4KMQ2 910 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 FAM171BQ6P995 826 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 IRF2BP1Q8IU81 584 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 GATA6Q92908 595 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 AGAP1Q9UPQ3 857 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 PCNX2A6NKB5 2137 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 C2orf78A6NCI8 922 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 KRT13P13646 458 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 BCKDHBP21953 392 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 ACAT1P24752 427 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 P2RY2P41231 377 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 DHPSP49366 369 aaPredicted RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 IRX4P78413 519 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 RBP5P82980 135 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 PPP3CAQ08209 521 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 MAPRE1Q15691 268 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 C2orf27AQ580R0 203 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 VSTM1Q6UX27 236 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 TRAPPC11Q7Z392 1133 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 ADGRF2Q8IZF7 708 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 MDGA1Q8NFP4 955 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 ANKRD36BP1Q96IX9 119 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 SCNM1Q9BWG6 230 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 NUSAP1Q9BXS6 441 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 SLC32A1Q9H598 525 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
LSM2-208ENST00000375661 NEUROG3Q9Y4Z2 214 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 SNX9Q9Y5X1 595 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
LSM2-208ENST00000375661 A0A0A0MRY4 1105 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 LEFTY2O00292 366 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 IKBKBO14920 756 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 GNA14O95837 355 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 TNNC2P02585 160 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 HOXD12P35452 270 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 SEC13P55735 322 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 SLC7A9P82251 487 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 NCAPHQ15003 741 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 TRIM61Q5EBN2 209 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 SLC23A3Q6PIS1 610 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 TRIM59Q8IWR1 403 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 PIGKQ92643 395 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 SLC35C1Q96A29 364 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 POLMQ9NP87 494 aaPredicted RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 SAMSN1Q9NSI8 373 aaKnown RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 TRPM5Q9NZQ8 1165 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 CDH9Q9ULB4 789 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 INVSQ9Y283 1065 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 NFE2L3Q9Y4A8 694 aa12.9□□□□□ -0.34
LSM2-208ENST00000375661 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
LSM2-208ENST00000375661 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.35
LSM2-208ENST00000375661 FRYQ5TBA9 3013 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
LSM2-208ENST00000375661 VNN1O95497 513 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 OLFM2O95897 454 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 APODP05090 189 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 KRT19P08727 400 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 ANXA13P27216 316 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 GCLMP48507 274 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 AP3M2P53677 418 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
LSM2-208ENST00000375661 SOWAHAQ2M3V2 549 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 UAP1L1Q3KQV9 507 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 ZACNQ401N2 412 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms