RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 TNPO2O14787 897 aaKnown RBP8.57□□□□□ -1.04
UBR4-202ENST00000375224 TREHO43280 583 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 ZNF24P17028 368 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 SDC4P31431 198 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 MAGEA4P43358 317 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 KYNUQ16719 465 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 SMTNL2Q2TAL5 461 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 RGMBQ6NW40 437 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 RSPH3Q86UC2 560 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 CRYBG2Q8N1P7 616 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 ACTL9Q8TC94 416 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 CCT8L2Q96SF2 557 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 RBM15Q96T37 977 aaKnown RBP eCLIP8.57□□□□□ -1.043e-6■■■□□ 17.2
UBR4-202ENST00000375224 NXF3Q9H4D5 531 aaKnown RBP8.57□□□□□ -1.04
UBR4-202ENST00000375224 PPANQ9NQ55 473 aaKnown RBP8.57□□□□□ -1.04
UBR4-202ENST00000375224 PCSK1NQ9UHG2 260 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 BAIAP2L1Q9UHR4 511 aa8.57□□□□□ -1.04
UBR4-202ENST00000375224 CORO1CQ9ULV4 474 aaPredicted RBP8.57□□□□□ -1.04
UBR4-202ENST00000375224 SCN1AP35498 2009 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 SMIM23A6NLE4 172 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 KPNA7A9QM74 516 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TRAPPC3O43617 180 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 LUC7L3O95232 432 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 PFKMP08237 780 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 STIP1P31948 543 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 GNL1P36915 607 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 BCAT1P54687 386 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 BST2Q10589 180 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 DYNC1I2Q13409 638 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 TMED1Q13445 227 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 KCNT1Q5JUK3 1230 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 CYB5D1Q6P9G0 228 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 CENPUQ71F23 418 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 BZW1Q7L1Q6 419 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 ARCQ7LC44 396 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 IFNL1Q8IU54 200 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 C12orf29Q8N999 325 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ANKRD52Q8NB46 1076 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 UHMK1Q8TAS1 419 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 SLC35F5Q8WV83 523 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HSPH1Q92598 858 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ACSF2Q96CM8 615 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 SELENOSQ9BQE4 189 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 DDX23Q9BUQ8 820 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 APOL6Q9BWW8 343 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HUS1O60921 280 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 DUSP11O75319 330 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 ENDOD1O94919 500 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HOXC8P31273 242 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 MAGEA10P43363 369 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 CDH6P55285 790 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 MXRA7P84157 204 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 DEUP1Q05D60 604 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 SREBF2Q12772 1141 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 NR1H3Q13133 447 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 KRT81Q14533 505 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 SOWAHAQ2M3V2 549 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 KBTBD12Q3ZCT8 623 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 CHADLQ6NUI6 762 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TLDC1Q6P9B6 456 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TMEM130Q8N3G9 435 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 MYCBPAPQ8TBZ2 947 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 ZNF473Q8WTR7 871 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 C18orf25Q96B23 403 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 CALN1Q9BXU9 219 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 SPC25Q9HBM1 224 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 GJD2Q9UKL4 321 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HES2Q9Y543 173 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ATXN2Q99700 1313 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 ZNF487B1APH4 448 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 CDH16O75309 829 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 IFNB1P01574 187 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 AKAP5P24588 427 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 EIF3EP60228 445 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 DYNLT1P63172 113 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 PURAQ00577 322 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 CCL14Q16627 93 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 GLRA4Q5JXX5 417 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ERMARDQ5T6L9 678 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 OLFML1Q6UWY5 402 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TTC30AQ86WT1 665 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 PPIL6Q8IXY8 311 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 CCDC13Q8IYE1 715 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 TOP6BLQ8N6T0 577 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HAUS1Q96CS2 278 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 XPO6Q96QU8 1125 aaKnown RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 MTG1Q9BT17 334 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 ADAM7Q9H2U9 754 aa8.56□□□□□ -1.04
UBR4-202ENST00000375224 ACTR5Q9H9F9 607 aaPredicted RBP8.56□□□□□ -1.04
UBR4-202ENST00000375224 DCDC2CA8MYV0 355 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 PPEF2O14830 753 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms