RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 SCFD1Q8WVM8 642 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 ZSCAN31Q96LW9 406 aaPredicted RBP18.63■□□□□ 0.57
H2AFX-201ENST00000375167 HAPLN2Q9GZV7 340 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 ANKRD6Q9Y2G4 727 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 NOTCH2Q04721 2471 aa18.63■□□□□ 0.57
H2AFX-201ENST00000375167 LAD1O00515 517 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 KRT10P13645 584 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 IL9RQ01113 521 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 VAC14Q08AM6 782 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 STARD3Q14849 445 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 ANO4Q32M45 955 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 SV2CQ496J9 727 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 CFAP221Q4G0U5 840 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 FBXL19Q6PCT2 694 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 SPATA2LQ8IUW3 424 aaPredicted RBP18.62■□□□□ 0.57
H2AFX-201ENST00000375167 TNFRSF25Q93038 417 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 CNDP2Q96KP4 475 aaKnown RBP18.62■□□□□ 0.57
H2AFX-201ENST00000375167 MYH11P35749 1972 aa18.62■□□□□ 0.57
H2AFX-201ENST00000375167 H0Y8X5 98 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 GFRA2O00451 464 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 WNT7AO00755 349 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 TRIM66O15016 1216 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 LDOC1O95751 146 aaPredicted RBP18.61■□□□□ 0.57
H2AFX-201ENST00000375167 ADRB2P07550 413 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
H2AFX-201ENST00000375167 GRIA4P48058 902 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 NFATC3Q12968 1075 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 INTS6LQ5JSJ4 861 aaKnown RBP18.61■□□□□ 0.57
H2AFX-201ENST00000375167 C6orf132Q5T0Z8 1188 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 ACBD6Q9BR61 282 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 RNF38Q9H0F5 515 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 ITM2CQ9NQX7 267 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 ORC3Q9UBD5 711 aaPredicted RBP18.61■□□□□ 0.57
H2AFX-201ENST00000375167 DERAQ9Y315 318 aa18.61■□□□□ 0.57
H2AFX-201ENST00000375167 TP53BP1Q12888 1972 aaPredicted RBP18.61■□□□□ 0.57
H2AFX-201ENST00000375167 KPNA7A9QM74 516 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 TERTO14746 1132 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 OGTO15294 1046 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 PAPSS1O43252 624 aaPredicted RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 ANKRD17O75179 2603 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 OLFM2O95897 454 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 MAPTP10636 758 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 ACADVLP49748 655 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 SMTNP53814 917 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 MYL7Q01449 175 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 DNAJC3Q13217 504 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 NSUN7Q8NE18 718 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 SNRNP27Q8WVK2 155 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 WASF1Q92558 559 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 FUBP3Q96I24 572 aaKnown RBP eCLIP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 NTPCRQ9BSD7 190 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 PCED1AQ9H1Q7 454 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 DNAJC17Q9NVM6 304 aaKnown RBP18.6■□□□□ 0.57
H2AFX-201ENST00000375167 EHD2Q9NZN4 543 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 KCNG1Q9UIX4 513 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 LRRK2Q5S007 2527 aa18.6■□□□□ 0.57
H2AFX-201ENST00000375167 KCNJ18B7U540 433 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 KCNK3O14649 394 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 DFNA5O60443 496 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 ABL1P00519 1130 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 MBL2P11226 248 aaPredicted RBP18.59■□□□□ 0.57
H2AFX-201ENST00000375167 GLDCP23378 1020 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
H2AFX-201ENST00000375167 GRIK1P39086 918 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 PPP3CCP48454 512 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 TPMTP51580 245 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 MAPK7Q13164 816 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 DHX40Q8IX18 779 aaKnown RBP18.59■□□□□ 0.57
H2AFX-201ENST00000375167 TMEM161BQ8NDZ6 487 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 KCNE4Q8WWG9 221 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 ZNF560Q96MR9 790 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 ZNF578Q96N58 590 aaPredicted RBP18.59■□□□□ 0.57
H2AFX-201ENST00000375167 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
H2AFX-201ENST00000375167 GTF3C4Q9UKN8 822 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
H2AFX-201ENST00000375167 ZNF840PA6NDX5 716 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 CBX4O00257 560 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 TRIM24O15164 1050 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 FAM189A1O60320 539 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 FDPSP14324 419 aaKnown RBP18.58■□□□□ 0.57
H2AFX-201ENST00000375167 MCM7P33993 719 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 MAGEA11P43364 429 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 LIG4P49917 911 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 ST3GAL1Q11201 340 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 ORC1Q13415 861 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 ECM1Q16610 540 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 FUT11Q495W5 492 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 ATG14Q6ZNE5 492 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 SPATA17Q96L03 361 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 PKMYT1Q99640 499 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 LLPHQ9BRT6 129 aaKnown RBP18.58■□□□□ 0.57
H2AFX-201ENST00000375167 OSGEPQ9NPF4 335 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 SPHK2Q9NRA0 654 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.57
H2AFX-201ENST00000375167 CLCA2Q9UQC9 943 aa18.58■□□□□ 0.57
H2AFX-201ENST00000375167 ENO4A6NNW6 628 aa18.57■□□□□ 0.56
H2AFX-201ENST00000375167 DTNBO60941 627 aa18.57■□□□□ 0.56
H2AFX-201ENST00000375167 OAS1P00973 400 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms