RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SCP2P22307 547 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 HSD17B4P51659 736 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 EMC2Q15006 297 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 KYNUQ16719 465 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 GLRA4Q5JXX5 417 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 HHIPL1Q96JK4 782 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SIKE1Q9BRV8 207 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ZFP14Q9HCL3 533 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 COG5Q9UP83 839 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SNX9Q9Y5X1 595 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CLASP2O75122 1294 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ALBP02768 609 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CAPZA2P47755 286 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CACNB1Q02641 598 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 STX5Q13190 355 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PHKG1Q16816 387 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CDO1Q16878 200 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SLC39A5Q6ZMH5 540 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 MTSS1LQ765P7 747 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 GPR141Q7Z602 305 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 FRMD5Q7Z6J6 570 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CHPFQ8IZ52 775 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 STAG2Q8N3U4 1231 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 EFCAB3Q8N7B9 438 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 DCBLD2Q96PD2 775 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CGRRF1Q99675 332 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 C11orf70Q9BRQ4 267 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PORCNQ9H237 461 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 PAPOLBQ9NRJ5 636 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 TRMT13Q9NUP7 481 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 VIRMAQ69YN4 1812 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 FGF19O95750 216 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 FCGR1AP12314 374 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 TUFMP49411 452 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 KCNK10P57789 538 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF235Q14590 738 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ATF7IP2Q5U623 682 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 APOBEC3HQ6NTF7 200 aaKnown RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 IKBIPQ70UQ0 350 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CCT8L2Q96SF2 557 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 FRMD8P1Q9BZ68 369 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-202ENST00000374541 EHD4Q9H223 541 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 BHMT2Q9H2M3 363 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 ZSWIM5Q9P217 1185 aa6.51□□□□□ -1.37
PTPN3-202ENST00000374541 SSU72P8A0A1W2PR75 194 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NFIBO00712 420 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 MTSS1O43312 755 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SPRP35270 261 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DSG1Q02413 1049 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 USP39Q53GS9 565 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FAM45BPQ6NSW5 357 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 C11orf88Q6PI97 169 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TRPM8Q7Z2W7 1104 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FAM124AQ86V42 546 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CCDC103Q8IW40 242 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 FAM162AQ96A26 154 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DCUN1D1Q96GG9 259 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CLEC4MQ9H2X3 399 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 EXOSC4Q9NPD3 245 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SLC45A1Q9Y2W3 748 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF521Q96K83 1311 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 C3orf70A6NLC5 250 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 UBXN8O00124 270 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TRIM24O15164 1050 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 GLUD2P49448 558 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 HPCAP84074 193 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PKP1Q13835 747 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NCAPHQ15003 741 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CYGBQ8WWM9 190 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 MCRS1Q96EZ8 462 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 C1QTNF7Q9BXJ2 289 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 IDI2Q9BXS1 227 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 SIK2Q9H0K1 926 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DDX47Q9H0S4 455 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 UTP6Q9NYH9 597 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 CTNNAL1Q9UBT7 734 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 NAGPAQ9UK23 515 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 AGAP1Q9UPQ3 857 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 EVPLLA8MZ36 301 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 M0QYV0 167 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 DGAT1O75907 488 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TRIM49P0CI25 452 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TRIM49CP0CI26 452 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 KNOP1Q1ED39 458 aaKnown RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM164Q5U3C3 297 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 TTC33Q6PID6 262 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-202ENST00000374541 PASD1Q8IV76 773 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 RIN3Q8TB24 985 aa6.5□□□□□ -1.37
PTPN3-202ENST00000374541 JADE3Q92613 823 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms