RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
COL16A1-203ENST00000373672 C11orf63Q6NUN7 778 aa18.61■□□□□ 0.57
COL16A1-203ENST00000373672 PAIP2BQ9ULR5 123 aaKnown RBP18.61■□□□□ 0.57
COL16A1-203ENST00000373672 SATB2Q9UPW6 733 aa18.61■□□□□ 0.57
COL16A1-203ENST00000373672 RRM2P31350 389 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 RAP1GAPP47736 663 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 CENPAP49450 140 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 AQP5P55064 265 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 NFYCQ13952 458 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 SLC25A13Q9UJS0 675 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 DSEQ9UL01 958 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 GRK2P25098 689 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 PSMA3P25788 255 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 NUP107P57740 925 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 FICDQ9BVA6 458 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 CYP3A43Q9HB55 503 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 CRTAMO95727 393 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 TOB1P50616 345 aaPredicted RBP18.6■□□□□ 0.57
COL16A1-203ENST00000373672 SREBF2Q12772 1141 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 C2CD6Q53TS8 623 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 LUZP2Q86TE4 346 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 E7ENQ6 273 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 PSMC3P17980 439 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 RRM1P23921 792 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 PEX5P50542 639 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 ZNF571Q7Z3V5 609 aaPredicted RBP18.6■□□□□ 0.57
COL16A1-203ENST00000373672 C11orf74Q86VG3 221 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 USP6NLQ92738 828 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 TMEM176AQ96HP8 235 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 NDUFA13Q9P0J0 144 aa18.6■□□□□ 0.57
COL16A1-203ENST00000373672 MYBPC2Q14324 1141 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 CEP78Q5JTW2 689 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 TRIM48Q8IWZ4 208 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 CAVIN3Q969G5 261 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 EMILIN2Q9BXX0 1053 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 RAD54BQ9Y620 910 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 KLRK1P26718 216 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 CLCN3P51790 818 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 FCGRTP55899 365 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 ITGA9Q13797 1035 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 TERB1Q8NA31 727 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 TMEM121Q9BTD3 319 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 PDGFCQ9NRA1 345 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 MAP3K13O43283 966 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 GLRBP48167 497 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 ZCWPW2Q504Y3 356 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
COL16A1-203ENST00000373672 SAMD7Q7Z3H4 446 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 GMCL1Q96IK5 515 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 MAP3K6O95382 1288 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 MBL2P11226 248 aaPredicted RBP18.59■□□□□ 0.57
COL16A1-203ENST00000373672 ITGALP20701 1170 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 GTF2A2P52657 109 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 DDX39BQ13838 428 aaKnown RBP18.59■□□□□ 0.57
COL16A1-203ENST00000373672 TMEM132BQ14DG7 1078 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 SLC47A2Q86VL8 602 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 TDRD5Q8NAT2 981 aaKnown RBP18.59■□□□□ 0.57
COL16A1-203ENST00000373672 C10orf88Q9H8K7 445 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 CTNNAL1Q9UBT7 734 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 SNX13Q9Y5W8 968 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 SPACA6W5XKT8 324 aa18.59■□□□□ 0.57
COL16A1-203ENST00000373672 RASSF9O75901 435 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 ALDH1A2O94788 518 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 PYGMP11217 842 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 PRKCQQ04759 706 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 CDC16Q13042 620 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 KRT78Q8N1N4 520 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 GLT1D1Q96MS3 346 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 CLPBQ9H078 707 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 CACNA2D2Q9NY47 1150 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 PIK3CDO00329 1044 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 LHX1P48742 406 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 TMED10P49755 219 aaKnown RBP18.58■□□□□ 0.57
COL16A1-203ENST00000373672 ALDH6A1Q02252 535 aaKnown RBP18.58■□□□□ 0.57
COL16A1-203ENST00000373672 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.58■□□□□ 0.57
COL16A1-203ENST00000373672 PDPK2PQ6A1A2 396 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 ERAP2Q6P179 960 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 UBXN6Q9BZV1 441 aa18.58■□□□□ 0.57
COL16A1-203ENST00000373672 PNMA8BQ9ULN7 279 aaPredicted RBP18.58■□□□□ 0.57
COL16A1-203ENST00000373672 SCAF8Q9UPN6 1271 aaKnown RBP18.58■□□□□ 0.57
COL16A1-203ENST00000373672 C2CD2LO14523 706 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 STRNO43815 780 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 B3GAT3O94766 335 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 MMRN1Q13201 1228 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 CDKAL1Q5VV42 579 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 C4orf19Q8IY42 314 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 JADE3Q92613 823 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 CEP152O94986 1710 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 SOX6P35712 828 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 SLC16A1P53985 500 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 ACER1Q8TDN7 264 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 SLC20A1Q8WUM9 679 aa18.58■□□□□ 0.56
COL16A1-203ENST00000373672 POP1Q99575 1024 aaKnown RBP18.58■□□□□ 0.56
COL16A1-203ENST00000373672 AGO4Q9HCK5 861 aaKnown RBP18.58■□□□□ 0.56
COL16A1-203ENST00000373672 OSGEPQ9NPF4 335 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms