RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 TWNKQ96RR1 684 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ACSS2Q9NR19 701 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SHOC2Q9UQ13 582 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SHANK3Q9BYB0 1731 aa18.36■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SERPINB3P29508 390 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 STIP1P31948 543 aaKnown RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ARL2P36404 184 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ADIGQ0VDE8 80 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 KCNT2Q6UVM3 1135 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 NFASCO94856 1347 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DGKDQ16760 1214 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PPP1R26Q5T8A7 1209 aaPredicted RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CNPY4Q8N129 248 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GPR20Q99678 358 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ELOVL4Q9GZR5 314 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SIGLEC16A6NMB1 481 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 EEF2KO00418 725 aaKnown RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 KCNA4P22459 653 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GTF2A2P52657 109 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FNBP1LQ5T0N5 605 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RNF139Q8WU17 664 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DDX1Q92499 740 aaKnown RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TNIP3Q96KP6 325 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CACNG4Q9UBN1 327 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GOLGA8CPA6NN73 597 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 F7P08709 466 aaPredicted RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 AVPR1AP37288 418 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 THOC5Q13769 683 aaKnown RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PRPSAP1Q14558 356 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ARL13BQ3SXY8 428 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SLC26A7Q8TE54 656 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.35■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CASTOR2A6NHX0 329 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PDHXO00330 501 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 KRT16P08779 473 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SPRED3Q2MJR0 410 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MMEL1Q495T6 779 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RGS9BPQ6ZS82 235 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FBXO6Q9NRD1 293 aaPredicted RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MAFBQ9Y5Q3 323 aaPredicted RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 DDX60LQ5H9U9 1706 aaKnown RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CLDN5O00501 218 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 HCRTO43612 131 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RECQL4O94761 1208 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GNASQ5JWF2 1037 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 POU5F2Q8N7G0 328 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 AGAP11Q8TF27 550 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TMEM120AQ9BXJ8 343 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 FOXP3Q9BZS1 431 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GPC4O75487 556 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ZWINTO95229 277 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CYP1A1P04798 512 aaPredicted RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 IL1R2P27930 398 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ELF1P32519 619 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 PRPF39Q86UA1 669 aaKnown RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 METTL23Q86XA0 190 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 OR6P1Q8NGX9 317 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 SNRNP25Q9BV90 132 aaKnown RBP18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 GTSE1Q9NYZ3 720 aa18.34■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MYO18AQ92614 2054 aaKnown RBP18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 WDR27A2RRH5 827 aa18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 MLH1P40692 756 aa18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 AQP5P55064 265 aa18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 CRELD2Q6UXH1 353 aaPredicted RBP18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 RIBC1Q8N443 379 aaPredicted RBP18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 LGMNQ99538 433 aa18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 TRIM56Q9BRZ2 755 aaKnown RBP18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ATXN3LQ9H3M9 355 aa18.33■□□□□ 0.53
TRAF3IP1-201ENST00000373327 ISLR2Q6UXK2 745 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FITM2Q8N6M3 262 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 IPMKQ8NFU5 416 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SPDL1Q96EA4 605 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ZNF560Q96MR9 790 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MRPL45Q9BRJ2 306 aaKnown RBP18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FSD1LQ9BXM9 530 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TCRBV7S3A2A0A539 114 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CETPP11597 493 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SLC12A1Q13621 1099 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 DEFB106AQ8N104 65 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
TRAF3IP1-201ENST00000373327 APOC4-APOC2K7ER74 178 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 APOC2P02655 101 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 EPHX2P34913 555 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CDKN2BP42772 138 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ZNF268Q14587 947 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TRABD2AQ86V40 505 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GPC2Q8N158 579 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PMPCBO75439 489 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 B3GAT3O94766 335 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms