RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PDZD8Q8NEN9 1154 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 FNIP1Q8TF40 1166 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 CASP10Q92851 521 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 METTL5Q9NRN9 209 aaKnown RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 DZANK1Q9NVP4 752 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 TRMT1Q9NXH9 659 aaKnown RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 CHORDC1Q9UHD1 332 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 SALL4Q9UJQ4 1053 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 COG5Q9UP83 839 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 MYO16Q9Y6X6 1858 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 YJEFN3A6XGL0 299 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 E7ENQ6 273 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 ABL1P00519 1130 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 RFC1P35251 1148 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-204ENST00000372243 PPP3CCP48454 512 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 HYAL1Q12794 435 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-204ENST00000372243 TAF12Q16514 161 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 TCEAL5Q5H9L2 206 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 EFHBQ8N7U6 833 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 STKLD1Q8NE28 680 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 GOLGA1Q92805 767 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 LRCH3Q96II8 777 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 ZNF512Q96ME7 567 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-204ENST00000372243 MCEEQ96PE7 176 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 POPDC2Q9HBU9 364 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 TRIM10Q9UDY6 481 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 GUCA1BQ9UMX6 200 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 MTCH2Q9Y6C9 303 aa16.61■□□□□ 0.25
TMEM53-204ENST00000372243 MYO9BQ13459 2157 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 DAB1O75553 588 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 LTFP02788 710 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 ZDHHC11BP0C7U3 371 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 TAF10Q12962 218 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 TAF5Q15542 800 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 SNX30Q5VWJ9 437 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 JOSD2Q8TAC2 188 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 FAM149B1Q96BN6 582 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 TLR8Q9NR97 1041 aaKnown RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 ABCC13Q9NSE7 274 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 CLIC5Q9NZA1 410 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 MAGED2Q9UNF1 606 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 C2CD4BA6NLJ0 364 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 NCK2O43639 380 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 XYLBO75191 536 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 RFPL2O75678 378 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 MATKP42679 507 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 NOP2P46087 812 aaKnown RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 BSPRYQ5W0U4 402 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 SCD5Q86SK9 330 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 VN1R2Q8NFZ6 395 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 NDRG1Q92597 394 aaKnown RBP16.6■□□□□ 0.25
TMEM53-204ENST00000372243 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 SFXN1Q9H9B4 322 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 RRN3Q9NYV6 651 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 ANAPC7Q9UJX3 599 aa16.6■□□□□ 0.25
TMEM53-204ENST00000372243 MYO1FO00160 1098 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 DPYSL4O14531 572 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 BUB1O43683 1085 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 GJB6O95452 261 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 FYNP06241 537 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 PTPN2P17706 415 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 NOS2P35228 1153 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 FLT3P36888 993 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 EPHA5P54756 1037 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 RNASE9P60153 205 aaKnown RBP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 ADGRE1Q14246 886 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 PABPC1LQ4VXU2 614 aaKnown RBP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 BTBD8Q5XKL5 378 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 LEMD2Q8NC56 503 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 IGFLR1Q9H665 355 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 NMUR1Q9HB89 426 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM53-204ENST00000372243 GMIPQ9P107 970 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 IP6K2Q9UHH9 426 aa16.59■□□□□ 0.25
TMEM53-204ENST00000372243 CCDC195A0A1B0GUA6 201 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 A0A1W2PQH9 124 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms