RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MYO7AQ13402 2215 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 LINC01565O15544 149 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 MEFVO15553 781 aaPredicted RBP14.75□□□□□ -0.05
LDB3-204ENST00000372066 RIPK2O43353 540 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 MBTPS2O43462 519 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 ITGB1P05556 798 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 DNAJB1P25685 340 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 PSMA2P25787 234 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 RAP1GAPP47736 663 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 PSMC1P62191 440 aaKnown RBP14.75□□□□□ -0.05
LDB3-204ENST00000372066 ADAM15Q13444 863 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 SNX1Q13596 522 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 NOTUMQ6P988 496 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 RELL1Q8IUW5 271 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 LRRC52Q8N7C0 313 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 KLHL23Q8NBE8 558 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 TTC13Q8NBP0 860 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 MCRS1Q96EZ8 462 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 KIF12Q96FN5 646 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 HERPUD2Q9BSE4 406 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 ELOVL4Q9GZR5 314 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 FAM107BQ9H098 131 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 ADAMTS10Q9H324 1103 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 CENPHQ9H3R5 247 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 SYNCQ9H7C4 482 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 CD207Q9UJ71 328 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 PCDHB7Q9Y5E2 793 aa14.75□□□□□ -0.05
LDB3-204ENST00000372066 hCG_1818297A0A087WSY0 165 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 O00370 1275 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 LIASO43766 372 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 MICAL2O94851 1124 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 AGTP01019 485 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 IVDP26440 423 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 IRS1P35568 1242 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 GJC1P36383 396 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 NDUFV1P49821 464 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 GATMP50440 423 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 YARSP54577 528 aaKnown RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 SNX16P57768 344 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 OGDHQ02218 1023 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 PDCLQ13371 301 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 SMAD4Q13485 552 aaKnown RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 DNAJC21Q5F1R6 531 aaKnown RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 ZFYVE27Q5T4F4 411 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 SPATS2Q86XZ4 545 aaKnown RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 XYLT1Q86Y38 959 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 BEST2Q8NFU1 509 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 POF1BQ8WVV4 589 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 ATG4AQ8WYN0 398 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 NKD2Q969F2 451 aaPredicted RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 SNX27Q96L92 541 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 NT5C1AQ9BXI3 368 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 SLC12A6Q9UHW9 1150 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 ANAPC5Q9UJX4 755 aa14.74□□□□□ -0.05
LDB3-204ENST00000372066 R3HDM2Q9Y2K5 976 aaKnown RBP14.74□□□□□ -0.05
LDB3-204ENST00000372066 F8VP50 259 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 M0QYV0 167 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 XPOTO43592 962 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 TBX10O75333 385 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 GJB6O95452 261 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ATF7P17544 494 aaPredicted RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 ATP5DP30049 168 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 LSP1P33241 339 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ADCY8P40145 1251 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ATP1A2P50993 1020 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 CDH8P55286 799 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 SLC29A2Q14542 456 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 SPOUT1Q5T280 376 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 CYP4A22Q5TCH4 519 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 LCLAT1Q6UWP7 414 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 MFSD7Q6UXD7 560 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 CATSPER4Q7RTX7 472 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 RBM23Q86U06 439 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 BCAS4Q8TDM0 211 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 MICAL1Q8TDZ2 1067 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 HEMGNQ9BXL5 484 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 EPN3Q9H201 632 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 CDHR5Q9HBB8 845 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 NOVA2Q9UNW9 492 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 SCN1AP35498 2009 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 GPR32O75388 356 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 RNF8O76064 485 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 NPTXRO95502 500 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ITGAVP06756 1048 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 DARSP14868 501 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 DESP17661 470 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 KLRC2P26717 231 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 RDXP35241 583 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 PCK1P35558 622 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 CDKN2BP42772 138 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 GPD2P43304 727 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ITGA8P53708 1063 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 SLC25A11Q02978 314 aaKnown RBP14.73□□□□□ -0.05
LDB3-204ENST00000372066 TAZQ16635 292 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 DAB2IPQ5VWQ8 1189 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 ADGRD2Q7Z7M1 963 aa14.73□□□□□ -0.05
LDB3-204ENST00000372066 UNC93AQ86WB7 457 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms