RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 SPEF1Q9Y4P9 236 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ABCB11O95342 1321 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RELAQ04206 551 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ALCAMQ13740 583 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 SEC23AQ15436 765 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 FASTKD1Q53R41 847 aaKnown RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 TEDDM1Q5T9Z0 273 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 FAAH2Q6GMR7 532 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 SYTL1Q8IYJ3 562 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 CENPSQ8N2Z9 138 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF713Q8N859 430 aaPredicted RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 GANQ9H2C0 597 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 PIH1D1Q9NWS0 290 aaKnown RBP12.19□□□□□ -0.46
PTPN1-201ENST00000371621 CROTQ9UKG9 612 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
PTPN1-201ENST00000371621 RAD51BO15315 384 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ALBP02768 609 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 RARBP10826 455 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 MYCLP12524 364 aaPredicted RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 COPZ1P61923 177 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ASTE1Q2TB18 679 aaPredicted RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SPDYAQ5MJ70 313 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SLC35C1Q96A29 364 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 UNKQ9C0B0 810 aaKnown RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ACSS2Q9NR19 701 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 AASDHPPTQ9NRN7 309 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 TMEM59LQ9UK28 342 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PDLIM1O00151 329 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 RGS5O15539 181 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ANXA13P27216 316 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SMU1Q2TAY7 513 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ZIK1Q3SY52 487 aaPredicted RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 TTC39BQ5VTQ0 682 aaPredicted RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 FRA10AC1Q70Z53 315 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 CDH24Q86UP0 819 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 DDIASQ8IXT1 998 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 FAM172AQ8WUF8 416 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 MCRS1Q96EZ8 462 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 NSMCE3Q96MG7 304 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SACM1LQ9NTJ5 587 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 KCNK4Q9NYG8 393 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 GTF3C4Q9UKN8 822 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 DDX3YO15523 660 aaKnown RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SPAG6O75602 509 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 MYO1DO94832 1006 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ALOX12P18054 663 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PLCL1Q15111 1095 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 AOC3Q16853 763 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PPM1LQ5SGD2 360 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 TLK2Q86UE8 772 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PEX5LQ8IYB4 626 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PLEKHA8Q96JA3 519 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 GRID1Q9ULK0 1009 aa12.18□□□□□ -0.46
PTPN1-201ENST00000371621 PDZK1P1A8MUH7 402 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 KCNN4O15554 427 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 CRTAMO95727 393 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 THRAP10827 490 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 S100A5P33763 92 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 GRM4Q14833 912 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 TBCCQ15814 346 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 PAGE2BQ5JRK9 111 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 NAT16Q8N8M0 369 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 BBS2Q9BXC9 721 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
PTPN1-201ENST00000371621 FAM96AQ9H5X1 160 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 ORC6Q9Y5N6 252 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SLC16A4O15374 487 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 KCNH1O95259 989 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 T-ENOLP0DO92 83 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 CETPP11597 493 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 ME2P23368 584 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 CCNG1P51959 295 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 PSMC6P62333 389 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 VWA5B1Q5TIE3 1220 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 CEP95Q96GE4 821 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 MCEEQ96PE7 176 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 EFCAB1Q9HAE3 211 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 AP4E1Q9UPM8 1137 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 PCDHGA3Q9Y5H0 932 aa12.17□□□□□ -0.46
PTPN1-201ENST00000371621 ST14Q9Y5Y6 855 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms