RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 VCLP18206 1134 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 POU4F1Q01851 419 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 CUL3Q13618 768 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 RFWD2Q8NHY2 731 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 SGF29Q96ES7 293 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 WWOXQ9NZC7 414 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 HES2Q9Y543 173 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 ADGRA2Q96PE1 1338 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 SDR42E2A6NKP2 422 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 LRRIQ3A6PVS8 624 aaPredicted RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 SPATA31C2B4DYI2 1134 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 PCDH8O95206 1070 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 MAPK7Q13164 816 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 LRRC8EQ6NSJ5 796 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 SCUBE3Q8IX30 993 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 BRD8Q9H0E9 1235 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ATP13A1Q9HD20 1204 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 TNFSF13BQ9Y275 285 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 BTBD19C9JJ37 291 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 VPS26AO75436 327 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 MAFO75444 373 aaPredicted RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 CRTAMO95727 393 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 LMNAP02545 664 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 STMN1P16949 149 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 OR1E1P30953 314 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 PABPC1LQ4VXU2 614 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 CES5AQ6NT32 575 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 LRRC6Q86X45 466 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 CLPBQ9H078 707 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ISCUQ9H1K1 167 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 KCTD10Q9H3F6 313 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ETNK1Q9HBU6 452 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 MICAL2O94851 1124 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 PTPN7P35236 360 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ERMARDQ5T6L9 678 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ANKRD23Q86SG2 305 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 MCOLN2Q8IZK6 566 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 CELF6Q96J87 481 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 NAT9Q9BTE0 207 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 DUSP10Q9Y6W6 482 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 RPSAP08865 295 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 ELNP15502 786 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 SH3BGRP55822 239 aaPredicted RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 LRIG3Q6UXM1 1119 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 TMA16Q96EY4 203 aaKnown RBP15.23■□□□□ 0.03
NDC1-201ENST00000371429 TBCBQ99426 244 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ING2Q9H160 280 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 KIF17Q9P2E2 1029 aa15.23■□□□□ 0.03
NDC1-201ENST00000371429 ATP9AO75110 1047 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 SERPINF2P08697 491 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CYP2F1P24903 491 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ALDH18A1P54886 795 aaKnown RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 PCBP1Q15365 356 aaKnown RBP eCLIP15.22■□□□□ 0.03
NDC1-201ENST00000371429 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 OR2W6PQ8NHA6 318 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 NRBF2Q96F24 287 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CAPNS2Q96L46 248 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ROPN1BQ9BZX4 212 aaPredicted RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 LRRC40Q9H9A6 602 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ROPN1Q9HAT0 212 aaPredicted RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 TRIM49D1C9J1S8 452 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 HMGCRP04035 888 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ITGB5P18084 799 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CTNNB1P35222 781 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 TUBP50607 506 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 PDE1CQ14123 709 aaPredicted RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 DEFB106AQ8N104 65 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 HAS1Q92839 578 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 GRK4P32298 578 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 GUCY1A3Q02108 690 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 NOMO2Q5JPE7 1267 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 ADAM32Q8TC27 787 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
NDC1-201ENST00000371429 ARHGAP20Q9P2F6 1191 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 FBXL21Q9UKT6 434 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 SF3B1O75533 1304 aaKnown RBP eCLIP15.22■□□□□ 0.039e-6■■■■■ 68.9
NDC1-201ENST00000371429 CYP3A7-CYP3A51PA0A087WV96 503 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 TISP43B9A030 160 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 EPB42P16452 691 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CYP3A7P24462 503 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CD52P31358 61 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 LRRC74AQ0VAA2 488 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CCDC149Q6ZUS6 474 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 GIMAP4Q9NUV9 329 aa15.22■□□□□ 0.03
NDC1-201ENST00000371429 CCDC85CA6NKD9 419 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 TRIM66O15016 1216 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 HDAC4P56524 1084 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 MMGT1Q8N4V1 131 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
NDC1-201ENST00000371429 CSGALNACT1Q8TDX6 532 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms