RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 ZSCAN32Q9NX65 697 aa11.29□□□□□ -0.6
EXOSC1-203ENST00000370886 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
EXOSC1-203ENST00000370886 NUMBLQ9Y6R0 609 aa11.29□□□□□ -0.6
EXOSC1-203ENST00000370886 ZNF197O14709 1029 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 LCP1P13796 627 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CYP11B1P15538 503 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 HMGA1P17096 107 aaKnown RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CEBPBP17676 345 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 YWHAQP27348 245 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CCR2P41597 374 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 PDE6CP51160 858 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 SLC5A3P53794 718 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 BCAT1P54687 386 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 JAM2P57087 298 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CYP4F8P98187 520 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 PFKPQ01813 784 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CSTF1Q05048 431 aaKnown RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 TAF10Q12962 218 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 UBXN2BQ14CS0 331 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 STILQ15468 1287 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 TEAD2Q15562 447 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 ASIC2Q16515 512 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 GPRIN1Q7Z2K8 1008 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 PIGZQ86VD9 579 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 ZBTB44Q8NCP5 570 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 ZMIZ2Q8NF64 920 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 SLC20A1Q8WUM9 679 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 FBXO32Q969P5 355 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 SPATA17Q96L03 361 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 NUP58Q9BVL2 599 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 CHORDC1Q9UHD1 332 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-203ENST00000370886 F5P12259 2224 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 DOCK6Q96HP0 2047 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 LRRC53A6NM62 1247 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 NCAM2O15394 837 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 PAPLNO95428 1278 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 POU2F2P09086 479 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 CDC25CP30307 473 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 TKTL1P51854 596 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 STXBP5Q5T5C0 1151 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 GPR158Q5T848 1215 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SPECC1LQ69YQ0 1117 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 GAREM2Q75VX8 874 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 MTSS1LQ765P7 747 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 TMC6Q7Z403 805 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 TMC8Q8IU68 726 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 DRC7Q8IY82 874 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 LEMD2Q8NC56 503 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 NDRG1Q92597 394 aaKnown RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 FGF13Q92913 245 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SLITRK1Q96PX8 696 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 FAM126AQ9BYI3 521 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 MIS12Q9H081 205 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 EHD2Q9NZN4 543 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 GMIPQ9P107 970 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 UXTQ9UBK9 157 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 RAB23Q9ULC3 237 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 DAAM1Q9Y4D1 1078 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.61
EXOSC1-203ENST00000370886 RALGAPA1Q6GYQ0 2036 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 HHLA1C9JL84 531 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 XPO1O14980 1071 aaKnown RBP11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 FGF19O95750 216 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 MMEP08473 750 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 TPM1P09493 284 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 USP17L7P0C7H9 530 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 SKILP12757 684 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 FERP16591 822 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 CASP14P31944 242 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 PBX1P40424 430 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 ZNF75DP51815 510 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 GPC5P78333 572 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 TXNDC8Q6A555 127 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 SARM1Q6SZW1 724 aa11.26□□□□□ -0.61
EXOSC1-203ENST00000370886 VSTM4Q8IW00 320 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms