RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.31■□□□□ 0.84
LMO4-202ENST00000370544 STRNO43815 780 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 VPS26AO75436 327 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 SUPT7LO94864 414 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 HLA-DPA1P20036 260 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 CCND1P24385 295 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 DUSP9Q99956 384 aaKnown RBP20.31■□□□□ 0.84
LMO4-202ENST00000370544 ZCWPW1Q9H0M4 648 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 ENTPD7Q9NQZ7 604 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 BLOC1S4Q9NUP1 217 aa20.31■□□□□ 0.84
LMO4-202ENST00000370544 EML1O00423 815 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CYTH3O43739 400 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 TBC1D4O60343 1298 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CKMP06732 381 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 RAB27AP51159 221 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 GCNT1Q02742 428 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 TRIP10Q15642 601 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 SLC27A1Q6PCB7 646 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 ZNF606Q8WXB4 792 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 ASCC2Q9H1I8 757 aaPredicted RBP20.3■□□□□ 0.84
LMO4-202ENST00000370544 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CNTNAP2Q9UHC6 1331 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CAND2O75155 1236 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CYP3A4P08684 503 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 HIST2H2ACQ16777 129 aaPredicted RBP20.3■□□□□ 0.84
LMO4-202ENST00000370544 ERMARDQ5T6L9 678 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 HIST2H2AA3Q6FI13 130 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 VPS37AQ8NEZ2 397 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CYGBQ8WWM9 190 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 SYNDIG1Q9H7V2 258 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 ZNF556Q9HAH1 456 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 ADORA2AP29274 412 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 DAB2P98082 770 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 GPC2Q8N158 579 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 TNIP2Q8NFZ5 429 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 SLC35C1Q96A29 364 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CCDC126Q96EE4 140 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 DRG1Q9Y295 367 aaKnown RBP20.3■□□□□ 0.84
LMO4-202ENST00000370544 AKAP5P24588 427 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 MFSD10Q14728 455 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 CCDC134Q9H6E4 229 aa20.3■□□□□ 0.84
LMO4-202ENST00000370544 KDM1AO60341 852 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 JCHAINP01591 159 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 SOAT1P35610 550 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 ZPBP2Q6X784 338 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 TRAPPC12Q8WVT3 735 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 PRPF18Q99633 342 aaKnown RBP20.29■□□□□ 0.84
LMO4-202ENST00000370544 RBBP8Q99708 897 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 APOL2Q9BQE5 337 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 PDGFCQ9NRA1 345 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.29■□□□□ 0.84
LMO4-202ENST00000370544 RHOCP08134 193 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 SKAP2O75563 359 aaPredicted RBP20.29■□□□□ 0.84
LMO4-202ENST00000370544 NFE2Q16621 373 aaPredicted RBP20.29■□□□□ 0.84
LMO4-202ENST00000370544 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.29■□□□□ 0.84
LMO4-202ENST00000370544 ASB7Q9H672 318 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 CHST12Q9NRB3 414 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 ACKR2O00590 384 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 POMCP01189 267 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 HOXA10P31260 410 aaPredicted RBP20.29■□□□□ 0.84
LMO4-202ENST00000370544 PTENP60484 403 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 FKBP1CQ5VVH2 108 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 DAB2IPQ5VWQ8 1189 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 STRA8Q7Z7C7 330 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 ELMO3Q96BJ8 720 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 VPS28Q9UK41 221 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 SYNPO2Q9UMS6 1093 aa20.29■□□□□ 0.84
LMO4-202ENST00000370544 TIMM13Q9Y5L4 95 aaPredicted RBP20.29■□□□□ 0.84
LMO4-202ENST00000370544 CNTFP26441 200 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 TARSP26639 723 aaKnown RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 KBTBD12Q3ZCT8 623 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 CAPRIN2Q6IMN6 1127 aaKnown RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 BTNL9Q6UXG8 535 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 SLC26A11Q86WA9 606 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 FAR2Q96K12 515 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 UBXN6Q9BZV1 441 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 TTLL13PA6NNM8 815 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 C16orf96A6NNT2 1141 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 MICAL2O94851 1124 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 NUDT2P50583 147 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 CNTN2Q02246 1040 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 COLGALT1Q8NBJ5 622 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 ACTL9Q8TC94 416 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 EVPLLA8MZ36 301 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 MAP4K3Q8IVH8 894 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 HERC6Q8IVU3 1022 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 BRSK2Q8IWQ3 736 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 GALNT4Q8N4A0 578 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 C3orf20Q8ND61 904 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 GIMAP4Q9NUV9 329 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 ADGRB2O60241 1585 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 NCAM2O15394 837 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 EPHB3P54753 998 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 DYNC1I2Q13409 638 aaKnown RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 ZNF268Q14587 947 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms