RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 GBP5Q96PP8 586 aa10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 TGS1Q96RS0 853 aaKnown RBP10.43□□□□□ -0.74
PRPF38B-203ENST00000370025 SCN1AP35498 2009 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SIGLEC16A6NMB1 481 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ASGR1P07306 291 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PRKAR2AP13861 404 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 MRPS35P82673 323 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 BNIP1Q12981 228 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 NFX1Q12986 1120 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 FBXO47Q5MNV8 452 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CCDC137Q6PK04 289 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 LCLAT1Q6UWP7 414 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CCDC105Q8IYK2 499 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 KATNAL2Q8IYT4 538 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PCYOX1Q9UHG3 505 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SCOCQ9UIL1 159 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SRRM3A6NNA2 597 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PODXLO00592 558 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PPEF2O14830 753 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ADAMTS4O75173 837 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 TOMM70O94826 608 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CYP3A5P20815 502 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 MMP13P45452 471 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 TAS2R40P59535 323 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 KCNA10Q16322 511 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CYP1B1Q16678 543 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 XKR4Q5GH76 650 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PCSK9Q8NBP7 692 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 OR6B3Q8NGW1 331 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ABTB1Q969K4 478 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 TLCD1Q96CP7 247 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CPXM1Q96SM3 734 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ERP44Q9BS26 406 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 VCXQ9H320 206 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 RNPEPL1Q9HAU8 725 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PREBQ9HCU5 417 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CASP8AP2Q9UKL3 1982 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 PFDN1O60925 122 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ELNP15502 786 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CALB2P22676 271 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CCND3P30281 292 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 KCNJ1P48048 391 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 DAB2IPQ5VWQ8 1189 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SERINC5Q86VE9 423 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 JAMLQ86YT9 394 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SMG8Q8ND04 991 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 UBA3Q8TBC4 463 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 SNRNP27Q8WVK2 155 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 MRPL45Q9BRJ2 306 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ARHGEF3Q9NR81 526 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CHST12Q9NRB3 414 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 RNF19AQ9NV58 838 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 RNF186Q9NXI6 227 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 CYTH4Q9UIA0 394 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 TSPAN16Q9UKR8 245 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
PRPF38B-203ENST00000370025 TCRBV7S2A1N4TA0A589 114 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 KPNA7A9QM74 516 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 PIRO00625 290 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 CTSHP09668 335 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 PSMA2P25787 234 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 COILP38432 576 aaPredicted RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 GPD2P43304 727 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 MAGEA10P43363 369 aaPredicted RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 TAF6P49848 677 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 LRRC38Q5VT99 294 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 ACOT1Q86TX2 421 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 RCOR2Q8IZ40 523 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 SEC14L1Q92503 715 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 HESX1Q9UBX0 185 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 GPR182O15218 404 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 GSTT1P30711 240 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 CCNFP41002 786 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 SNX16P57768 344 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 SV2CQ496J9 727 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 FOXB2Q5VYV0 432 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 XYLT1Q86Y38 959 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 SRRM1Q8IYB3 904 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 NIPA2Q8N8Q9 360 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM13CQ8NE31 585 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 KLHDC9Q8NEP7 349 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM210AQ96ND0 272 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 MYLK2Q9H1R3 596 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 PABPC3Q9H361 631 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 LRRC19Q9H756 370 aa10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-203ENST00000370025 A8MXQ7 604 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 F8VP50 259 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 CREB3O43889 395 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ERBB2P04626 1255 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 TPBGLP0DKB5 382 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms