RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 DDX3XO00571 662 aaKnown RBP eCLIP13.3□□□□□ -0.284e-44■■■■■ 28.8
EFNA1-201ENST00000368406 MOSPD3O75425 235 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 FBXO21O94952 628 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 ZBED1O96006 694 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CYP1A1P04798 512 aaPredicted RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CALB1P05937 261 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 GABRR2P28476 465 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 USP46P62068 366 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 ZXDAP98168 799 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CDK17Q00537 523 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CENPCQ03188 943 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 TDGQ13569 410 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 HTR4Q13639 388 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 SPA17Q15506 151 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 ACAD10Q6JQN1 1059 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 MTSS1LQ765P7 747 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 TRMT2BQ96GJ1 504 aaKnown RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 ULBP1Q9BZM6 244 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 EPHX3Q9H6B9 360 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 LUC7LQ9NQ29 371 aaKnown RBP13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 SPTLC3Q9NUV7 552 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 COMMD8Q9NX08 183 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 ADAM22Q9P0K1 906 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 CYTH4Q9UIA0 394 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 STRIP2Q9ULQ0 834 aa13.3□□□□□ -0.28
EFNA1-201ENST00000368406 A0A087X0T9 212 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TNFRSF10BO14763 440 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SART1O43290 800 aaKnown RBP13.29□□□□□ -0.28
EFNA1-201ENST00000368406 RTN2O75298 545 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ASGR2P07307 311 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 FAM228BP0C875 321 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 UNGP13051 313 aaPredicted RBP13.29□□□□□ -0.28
EFNA1-201ENST00000368406 CEBPBP17676 345 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 CDC25CP30307 473 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TAF10Q12962 218 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 PTPN20Q4JDL3 420 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 GAREM2Q75VX8 874 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 WDTC1Q8N5D0 677 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ING5Q8WYH8 240 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 FAM149B1Q96BN6 582 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ZNF653Q96CK0 615 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 C18orf8Q96DM3 657 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SYT11Q9BT88 431 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 C1QTNF1Q9BXJ1 281 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 NACA2Q9H009 215 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
EFNA1-201ENST00000368406 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
EFNA1-201ENST00000368406 TRPM5Q9NZQ8 1165 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 GMIPQ9P107 970 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ZMYM5Q9UJ78 669 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 NAGPAQ9UK23 515 aa13.29□□□□□ -0.28
EFNA1-201ENST00000368406 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
EFNA1-201ENST00000368406 A0A1W2PRU2 124 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
EFNA1-201ENST00000368406 ERBB2P04626 1255 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 ABCB4P21439 1286 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 WEE1P30291 646 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 TEAD2Q15562 447 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 C2CD6Q53TS8 623 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
EFNA1-201ENST00000368406 ALKBH5Q6P6C2 394 aaKnown RBP13.28□□□□□ -0.28
EFNA1-201ENST00000368406 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 MRPS31Q92665 395 aaKnown RBP13.28□□□□□ -0.28
EFNA1-201ENST00000368406 MCRS1Q96EZ8 462 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 TRPV4Q9HBA0 871 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
EFNA1-201ENST00000368406 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms