RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CRACR2AQ9BSW2 395 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 ADAM7Q9H2U9 754 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 KANSL2Q9H9L4 492 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 KCNK12Q9HB15 430 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 PLCB1Q9NQ66 1216 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 BLOC1S4Q9NUP1 217 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 AGPAT5Q9NUQ2 364 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 AIPL1Q9NZN9 384 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 KCND2Q9NZV8 630 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 NYAP2Q9P242 653 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 DDX25Q9UHL0 483 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 INTUQ9ULD6 942 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 PLXNA4Q9HCM2 1894 aa6.95□□□□□ -1.3
ECHDC1-202ENST00000368289 LRBAP50851 2863 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 TTC3P53804 2025 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 KIAA1671Q9BY89 1806 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ITPR2Q14571 2701 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRK2Q5S007 2527 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 TICRRQ7Z2Z1 1910 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CREBBPQ92793 2442 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 MYMKA6NI61 221 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 RSPH10B2B2RC85 870 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 GOLGA8KD6RF30 607 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 HAS3O00219 553 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 TULP2O00295 520 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CETN3O15182 167 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CALUO43852 315 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 N4BP1O75113 896 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 DGKIO75912 1065 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SEC31AO94979 1220 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 KCNK5O95279 499 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 RSPH10BP0C881 870 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 EPB41P11171 864 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 TDGF1P13385 188 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PLA2G2AP14555 144 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ETFBP38117 255 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 GATMP50440 423 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 VSNL1P62760 191 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 MYBPC2Q14324 1141 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ZSCAN26Q16670 478 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CCDC96Q2M329 555 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC35G1Q2M3R5 365 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ASTE1Q2TB18 679 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 Q4G0T1 1027 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ZCWPW2Q504Y3 356 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM26FQ5R3K3 315 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SFMBT2Q5VUG0 894 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PDXDC1Q6P996 788 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRC55Q6ZSA7 311 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 STXBP4Q6ZWJ1 553 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 VPS36Q86VN1 386 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SPATS2Q86XZ4 545 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 IFT20Q8IY31 132 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CAVIN3Q969G5 261 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PBKQ96KB5 322 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC6A18Q96N87 628 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PNKPQ96T60 521 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PSTPIP2Q9H939 334 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 JADE2Q9NQC1 790 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SEMA4GQ9NTN9 838 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PANK4Q9NVE7 773 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CYP39A1Q9NYL5 469 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ANKFY1Q9P2R3 1169 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 SUCOQ9UBS9 1254 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 WNT16Q9UBV4 365 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 ZC3H7BQ9UGR2 993 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 CA14Q9ULX7 337 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 TRAF3IP3Q9Y228 551 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 MTF2Q9Y483 593 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHGA2Q9Y5H1 932 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 UBE4BO95155 1302 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 FBN3Q75N90 2809 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
ECHDC1-202ENST00000368289 A0A0A6YYK5 440 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 A0A1W2PQH9 124 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 TMEM8BA6NDV4 472 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 PDXKO00764 312 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 ENPP3O14638 875 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 POLR3GO15318 223 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC16A3O15427 465 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 ATP1A1P05023 1023 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CYP3A4P08684 503 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 RHOXF2BP0C7M4 288 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 GAP43P17677 238 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 ITGB7P26010 798 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 RPA1P27694 616 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CDC25AP30304 524 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CIITAP33076 1130 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CLCN7P51798 805 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 NPEPPSP55786 919 aa6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 CSTF1Q05048 431 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 BTG3Q14201 252 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC18A3Q16572 532 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms