RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RNF38Q9H0F5 515 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 VPS16Q9H269 839 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 EPC1Q9H2F5 836 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 CSNK1G1Q9HCP0 422 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 TDP1Q9NUW8 608 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 FANCLQ9NW38 375 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 WNT6Q9Y6F9 365 aa15.47■□□□□ 0.07
SF3B5-201ENST00000367569 M0QYV0 167 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 O00370 1275 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 MBL2P11226 248 aaPredicted RBP15.46■□□□□ 0.07
SF3B5-201ENST00000367569 HDCP19113 662 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 RGS7P49802 495 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 KLK7P49862 253 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 KPNA1P52294 538 aaPredicted RBP15.46■□□□□ 0.07
SF3B5-201ENST00000367569 ZXDBP98169 803 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 PDE4CQ08493 712 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 MTF1Q14872 753 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 ZNF77Q15935 545 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 VWA3BQ502W6 1294 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 TCP11X2Q5H9J9 407 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 ARHGAP17Q68EM7 881 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 TXNDC11Q6PKC3 985 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 PIGZQ86VD9 579 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 SH3RF2Q8TEC5 729 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 LSM14BQ9BX40 385 aaKnown RBP15.46■□□□□ 0.07
SF3B5-201ENST00000367569 DUSP16Q9BY84 665 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 NDST4Q9H3R1 872 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 EBF3Q9H4W6 596 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 NMUR1Q9HB89 426 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 SIX2Q9NPC8 291 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 RBM12Q9NTZ6 932 aaKnown RBP15.46■□□□□ 0.07
SF3B5-201ENST00000367569 OSER1Q9NX31 292 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 NCDNQ9UBB6 729 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 SMG5Q9UPR3 1016 aaKnown RBP15.46■□□□□ 0.07
SF3B5-201ENST00000367569 CPQQ9Y646 472 aa15.46■□□□□ 0.07
SF3B5-201ENST00000367569 A0A1W2PQH9 124 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 SYCE3A1L190 88 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 COCHO43405 550 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 OAS1P00973 400 aaKnown RBP15.45■□□□□ 0.06
SF3B5-201ENST00000367569 PON1P27169 355 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 SATB1Q01826 763 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 MYL5Q02045 173 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 GCNT1Q02742 428 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 KRT31Q15323 416 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 CDKAL1Q5VV42 579 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 NAIF1Q69YI7 327 aaPredicted RBP15.45■□□□□ 0.06
SF3B5-201ENST00000367569 TTC39CQ8N584 583 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
SF3B5-201ENST00000367569 WBP2Q969T9 261 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 IER2Q9BTL4 223 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 FAM126AQ9BYI3 521 aaPredicted RBP15.45■□□□□ 0.06
SF3B5-201ENST00000367569 DNAI2Q9GZS0 605 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
SF3B5-201ENST00000367569 HPS4Q9NQG7 708 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 OBP2AQ9NY56 170 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 EHD2Q9NZN4 543 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 APEX2Q9UBZ4 518 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 MYOFQ9NZM1 2061 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 KIAA1549LQ6ZVL6 1849 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 NCOR2Q9Y618 2525 aa15.45■□□□□ 0.06
SF3B5-201ENST00000367569 BECN2A8MW95 431 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 LEFTY2O00292 366 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 TBX18O95935 607 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 VDRP11473 427 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 WEE1P30291 646 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 CXCL12P48061 93 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 CCR3P51677 355 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 ZNF132P52740 706 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 BCAT1P54687 386 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 ADIGQ0VDE8 80 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 PDZD8Q8NEN9 1154 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 SECISBP2LQ93073 1101 aaKnown RBP15.44■□□□□ 0.06
SF3B5-201ENST00000367569 MSANTD3Q96H12 275 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 FAXDC2Q96IV6 333 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 CEP295NLQ96MC4 621 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 ULBP1Q9BZM6 244 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 NACA2Q9H009 215 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 CFAP97Q9P2B7 532 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 HESX1Q9UBX0 185 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 NAGPAQ9UK23 515 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 FHOD1Q9Y613 1164 aa15.44■□□□□ 0.06
SF3B5-201ENST00000367569 SPTBN2O15020 2390 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 OTOL1A6NHN0 477 aaPredicted RBP15.43■□□□□ 0.06
SF3B5-201ENST00000367569 THAP12O43422 761 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 TLR5O60602 858 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
SF3B5-201ENST00000367569 LCP1P13796 627 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 EEF1GP26641 437 aaKnown RBP15.43■□□□□ 0.06
SF3B5-201ENST00000367569 CTHP32929 405 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 TKTL1P51854 596 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 KIF11P52732 1056 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 MFAP3P55082 362 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 BST2Q10589 180 aaKnown RBP15.43■□□□□ 0.06
SF3B5-201ENST00000367569 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
SF3B5-201ENST00000367569 RAPGEF1Q13905 1077 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms