RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KRT72Q14CN4 511 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 PABPC1LQ4VXU2 614 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 RARS2Q5T160 578 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
LDB3-202ENST00000361373 HS6ST3Q8IZP7 471 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 SNX31Q8N9S9 440 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 STN1Q9H668 368 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 TRIM49D1C9J1S8 452 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 TBX4P57082 545 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 LRRC8EQ6NSJ5 796 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 PCDH9Q9HC56 1237 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 CNTNAP2Q9UHC6 1331 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 TRHDEQ9UKU6 1024 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 PLA2G4CQ9UP65 541 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 LRRC10BA6NIK2 292 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 SPDYE5A6NIY4 337 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 C5orf58C9J3I9 102 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 TRIM66O15016 1216 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 LZTS3O60299 673 aaPredicted RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 HNRNPH2P55795 449 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 CREMQ03060 361 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 SPDYE7PQ495Y7 208 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 SYTL2Q9HCH5 934 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 GIMAP4Q9NUV9 329 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 GID8Q9NWU2 228 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 KIF17Q9P2E2 1029 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.93□□□□□ -0.18
LDB3-202ENST00000361373 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
LDB3-202ENST00000361373 LYPLA2O95372 231 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 AKAP5P24588 427 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 CYP2C18P33260 490 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 PGM1P36871 562 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 PLA2G4AP47712 749 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 POU4F1Q01851 419 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 ST3GAL1Q11201 340 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 C16orf89Q6UX73 402 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
LDB3-202ENST00000361373 CARNMT1Q8N4J0 409 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 OR9Q1Q8NGQ5 310 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 CLCA2Q9UQC9 943 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 CSDE1O75534 798 aaKnown RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 SERPINB8P50452 374 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 C6orf10Q5SRN2 563 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 DENND5BQ6ZUT9 1274 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 ADAM2Q99965 735 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 GOLGA8TH3BQL2 631 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 RECQL4O94761 1208 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 MARC1Q5VT66 337 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
LDB3-202ENST00000361373 AGR3Q8TD06 166 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 ZIM3Q96PE6 472 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 VAT1Q99536 393 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SHOC2Q9UQ13 582 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 JCHAINP01591 159 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SERPINF2P08697 491 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 CDH2P19022 906 aaPredicted RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 PMS1P54277 932 aaKnown RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 C3orf20Q8ND61 904 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 RAMP2O60895 175 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SRP72O76094 671 aaKnown RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 RGS9BPQ6ZS82 235 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SUGP1Q8IWZ8 645 aaKnown RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 HASPINQ8TF76 798 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 HAS1Q92839 578 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 ACSF2Q96CM8 615 aaPredicted RBP13.92□□□□□ -0.18
LDB3-202ENST00000361373 CCT8L2Q96SF2 557 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 SLC24A2Q9UI40 661 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 TEKT2Q9UIF3 430 aa13.92□□□□□ -0.18
LDB3-202ENST00000361373 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 CYP2F1P24903 491 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 VCPP55072 806 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 SLC6A3Q01959 620 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 KBTBD12Q3ZCT8 623 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 AASDHQ4L235 1098 aaPredicted RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 MROH9Q5TGP6 573 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 LVRNQ6Q4G3 990 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 PATL1Q86TB9 770 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 PACSIN1Q9BY11 444 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 LACRTQ9GZZ8 138 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 CLPBQ9H078 707 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 FRMD3A2A2Y4 597 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
LDB3-202ENST00000361373 ACTL9Q8TC94 416 aa13.91□□□□□ -0.18
LDB3-202ENST00000361373 WNK4Q96J92 1243 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms