RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KLHL33A6NCF5 533 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 ADAMTS3O15072 1205 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 KCNQ2O43526 872 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 GALK1P51570 392 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 SNX32Q86XE0 403 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 SAE1Q9UBE0 346 aaPredicted RBP16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 C15orf38-AP3S2A0A0A6YYH1 394 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 POLRMTO00411 1230 aaKnown RBP16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 ASMTLO95671 621 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 CCNB1P14635 433 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 WDR4P57081 412 aaKnown RBP16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 ARHGAP8P85298 464 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 UBAP2LQ14157 1087 aaKnown RBP16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 UGP2Q16851 508 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 XKR3Q5GH77 459 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 ARPINQ7Z6K5 226 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 ALLCQ8N6M5 410 aa16.52■□□□□ 0.23
CLSTN1-201ENST00000361311 XPOTO43592 962 aaKnown RBP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TBX10O75333 385 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TM7SF2O76062 418 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF606Q8WXB4 792 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 SGF29Q96ES7 293 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 DACH2Q96NX9 599 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 DRG1Q9Y295 367 aaKnown RBP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 F8VP50 259 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 RTP1P59025 263 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 EFHC2Q5JST6 749 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 ZBTB41Q5SVQ8 909 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 SULF1Q8IWU6 871 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 EFCAB3Q8N7B9 438 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TDRD5Q8NAT2 981 aaKnown RBP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 CYLDQ9NQC7 956 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TAS2R1Q9NYW7 299 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 STAP1Q9ULZ2 295 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 SDR42E2A6NKP2 422 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 PYGLP06737 847 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 GARTP22102 1010 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 PKNOX1P55347 436 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 JAM2P57087 298 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 USP4Q13107 963 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 NRF1Q16656 503 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 C16orf46Q6P387 395 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 TSPAN14Q8NG11 270 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 PCDHB18PQ96TA0 734 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 C17orf75Q9HAS0 396 aa16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
CLSTN1-201ENST00000361311 C1orf232A0A0U1RR37 186 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 DAB2P98082 770 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 CNPY1Q3B7I2 92 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 RINLQ6ZS11 566 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 FAM228AQ86W67 206 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 ZBTB18Q99592 522 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 MRPS26Q9BYN8 205 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 ZMPSTE24O75844 475 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 APOA4P06727 396 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 MMP10P09238 476 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 MLH1P40692 756 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 HYIQ5T013 277 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF555Q8NEP9 628 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 EPAS1Q99814 870 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 ZNF518BQ9C0D4 1074 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 VCLP18206 1134 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 PSMA4P25789 261 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 EFNA5P52803 228 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 XIAPP98170 497 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 SEZ6Q53EL9 994 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 UBA3Q8TBC4 463 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 C12orf65Q9H3J6 166 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 USP18Q9UMW8 372 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 V9GYQ6 96 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 SAC3D1A6NKF1 404 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 SERPINA6P08185 405 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 HIRAP54198 1017 aaPredicted RBP16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 TERB1Q8NA31 727 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 S100A14Q9HCY8 104 aa16.5■□□□□ 0.23
CLSTN1-201ENST00000361311 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 SLC4A1P02730 911 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 MTMR2Q13614 643 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 PLD3Q8IV08 490 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 TTC39CQ8N584 583 aa16.49■□□□□ 0.23
CLSTN1-201ENST00000361311 RNF149Q8NC42 400 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms