RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ZNF513Q8N8E2 541 aaPredicted RBP22.4■■□□□ 1.18
CD47-202ENST00000361309 LINC00301Q8NCQ3 95 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 SCFD1Q8WVM8 642 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 SYAP1Q96A49 352 aaPredicted RBP22.4■■□□□ 1.18
CD47-202ENST00000361309 MED10Q9BTT4 135 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 ZSCAN16Q9H4T2 348 aaPredicted RBP22.4■■□□□ 1.18
CD47-202ENST00000361309 SMYD3Q9H7B4 428 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 ATP8B3O60423 1300 aa22.39■■□□□ 1.18
CD47-202ENST00000361309 UBE4BO95155 1302 aa22.39■■□□□ 1.18
CD47-202ENST00000361309 PHACTR2O75167 634 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 TULP3O75386 442 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 ITPKAP23677 461 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 SLC5A3P53794 718 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 SNX30Q5VWJ9 437 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 CNNM4Q6P4Q7 775 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 SLC23A3Q6PIS1 610 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 PAQR9Q6ZVX9 377 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 WBP2Q969T9 261 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 SLC32A1Q9H598 525 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 SPHK2Q9NRA0 654 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 DEC1Q9P2X7 70 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 PILRBQ9UKJ0 227 aa22.39■■□□□ 1.17
CD47-202ENST00000361309 PCDH15Q96QU1 1955 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 DMXL2Q8TDJ6 3036 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 SPTLC2O15270 562 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 HOXC11O43248 304 aaPredicted RBP22.38■■□□□ 1.17
CD47-202ENST00000361309 CFIP05156 583 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 DPP6P42658 865 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 CASP4P49662 377 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 SNRPFP62306 86 aaKnown RBP22.38■■□□□ 1.17
CD47-202ENST00000361309 ANO4Q32M45 955 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 PREPLQ4J6C6 727 aaPredicted RBP22.38■■□□□ 1.17
CD47-202ENST00000361309 C10orf76Q5T2E6 689 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 KIAA1211LQ6NV74 962 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 TRMT11Q7Z4G4 463 aaKnown RBP22.38■■□□□ 1.17
CD47-202ENST00000361309 TMEM25Q86YD3 366 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 DEFB119Q8N690 84 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 KCNV2Q8TDN2 545 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 GATA6Q92908 595 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 C7orf25Q9BPX7 421 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 DMAP1Q9NPF5 467 aaPredicted RBP22.38■■□□□ 1.17
CD47-202ENST00000361309 FSCN3Q9NQT6 498 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 FOXD4L1Q9NU39 408 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 IL37Q9NZH6 218 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 GMIPQ9P107 970 aa22.38■■□□□ 1.17
CD47-202ENST00000361309 TRIM24O15164 1050 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 AP5Z1O43299 807 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 CLSTN1O94985 981 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 IRF1P10914 325 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 GABRG2P18507 467 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 CASP1P29466 404 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 WASP42768 502 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 TUBP50607 506 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 RPL6Q02878 288 aaKnown RBP22.37■■□□□ 1.17
CD47-202ENST00000361309 EHHADHQ08426 723 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 PEAR1Q5VY43 1037 aaPredicted RBP22.37■■□□□ 1.17
CD47-202ENST00000361309 SCARA5Q6ZMJ2 495 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 UNC13DQ70J99 1090 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 TERB1Q8NA31 727 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 IQUBQ8NA54 791 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 ELMO3Q96BJ8 720 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 DUSP9Q99956 384 aaKnown RBP22.37■■□□□ 1.17
CD47-202ENST00000361309 TFIP11Q9UBB9 837 aaKnown RBP22.37■■□□□ 1.17
CD47-202ENST00000361309 HCN2Q9UL51 889 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 PKD1L2Q7Z442 2459 aa22.37■■□□□ 1.17
CD47-202ENST00000361309 DSPP15924 2871 aaKnown RBP22.36■■□□□ 1.17
CD47-202ENST00000361309 STX6O43752 255 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 PPP6R2O75170 966 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 AP1G2O75843 785 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 ZDHHC11BP0C7U3 371 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 BIRC3Q13489 604 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 ZNF699Q32M78 642 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 NUDT18Q6ZVK8 323 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 PIP4P1Q86T03 277 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 MIB1Q86YT6 1006 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 PLEKHO2Q8TD55 490 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 SMARCD1Q96GM5 515 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 INTS4Q96HW7 963 aaKnown RBP22.36■■□□□ 1.17
CD47-202ENST00000361309 TNIP3Q96KP6 325 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 NACA2Q9H009 215 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 VRTNQ9H8Y1 702 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 CALCOCO1Q9P1Z2 691 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 ATRXP46100 2492 aa22.36■■□□□ 1.17
CD47-202ENST00000361309 SPAARA0A1B0GVQ0 90 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 FAM92AA1XBS5 289 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 TMEM8BA6NDV4 472 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 HYAL3O43820 417 aaPredicted RBP22.35■■□□□ 1.17
CD47-202ENST00000361309 EXOC3O60645 756 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 HOXB2P14652 356 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 NTSR1P30989 418 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 HOXD12P35452 270 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 PGFP49763 221 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 SEMA3BQ13214 749 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 DUOXA1Q1HG43 343 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 ZNF667Q5HYK9 610 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 SHC4Q6S5L8 630 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 SLC36A4Q6YBV0 504 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 ACOT1Q86TX2 421 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 C12orf56Q8IXR9 622 aa22.35■■□□□ 1.17
CD47-202ENST00000361309 FUKQ8N0W3 1084 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms