RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 A0A1W2PQJ5 194 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 FAM170AA1A519 330 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TNFRSF10AO00220 468 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PRAMEF12O95522 483 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 LSM8O95777 96 aaKnown RBP20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ATP5C1P36542 298 aaKnown RBP20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PBX1P40424 430 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TUBP50607 506 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GOLGA8FQ08AF8 430 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GOLGA8DPQ0D2H9 430 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GRM2Q14416 872 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TSR1Q2NL82 804 aaKnown RBP20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SARM1Q6SZW1 724 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TRIM72Q6ZMU5 477 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SLC44A3Q8N4M1 653 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DEPDC1BQ8WUY9 529 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 BAP1Q92560 729 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NDRG1Q92597 394 aaKnown RBP20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TRMT61BQ9BVS5 477 aaKnown RBP20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TRPV4Q9HBA0 871 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CYLDQ9NQC7 956 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CPQQ9Y646 472 aa20.12■□□□□ 0.81
HLA-DRB1-201ENST00000360004 MYO16Q9Y6X6 1858 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PATJQ8NI35 1801 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 UNC80Q8N2C7 3258 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 E5RJQ4 531 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 COCHO43405 550 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DCXO43602 365 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 OAS1P00973 400 aaKnown RBP20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZDHHC11BP0C7U3 371 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ALADP13716 330 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PSMC3P17980 439 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TNFAIP3P21580 790 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 WEE1P30291 646 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DAOAP59103 153 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZBED6P86452 979 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 KLHL30Q0D2K2 578 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TDRD12Q587J7 1177 aaKnown RBP20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SNX30Q5VWJ9 437 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NAA35Q5VZE5 725 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 OR6B2Q6IFH4 312 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ERICH1Q86X53 443 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DDX42Q86XP3 938 aaKnown RBP eCLIP20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SCUBE3Q8IX30 993 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 BPIFB1Q8TDL5 484 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 IRGQQ8WZA9 623 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 USP13Q92995 863 aaPredicted RBP20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SLC22A12Q96S37 553 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 AGPAT1Q99943 283 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TRIM62Q9BVG3 475 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SLC4A5Q9BY07 1137 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 BRD9Q9H8M2 597 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NMUR1Q9HB89 426 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 OBP2AQ9NY56 170 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CLIC5Q9NZA1 410 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 RASAL2Q9UJF2 1139 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NOCTQ9UK39 431 aaKnown RBP20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 FBXL21Q9UKT6 434 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 STRIP2Q9ULQ0 834 aa20.11■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GREB1Q4ZG55 1949 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CAPN9O14815 690 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZNF263O14978 683 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 FCARP24071 287 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GDI1P31150 447 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CASP14P31944 242 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZNF268Q14587 947 aaPredicted RBP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PM20D1Q6GTS8 502 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 POTEHQ6S545 545 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 VITQ6UXI7 678 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TMC6Q7Z403 805 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SCD5Q86SK9 330 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 VSTM4Q8IW00 320 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 MFSD6LQ8IWD5 586 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 UBALD2Q8IYN6 164 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SH3RF2Q8TEC5 729 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DDX1Q92499 740 aaKnown RBP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CPXM1Q96SM3 734 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 RPP25Q9BUL9 199 aaKnown RBP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TTYH3Q9C0H2 523 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ABCC13Q9NSE7 274 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 OLA1Q9NTK5 396 aaKnown RBP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZNHIT6Q9NWK9 470 aaKnown RBP20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CYTH4Q9UIA0 394 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DNMT3LQ9UJW3 386 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NUDT5Q9UKK9 219 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CAPN11Q9UMQ6 739 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ARHGAP26Q9UNA1 814 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SH3BP1Q9Y3L3 701 aa20.1■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DOCK8Q8NF50 2099 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 C5orf42Q9H799 3197 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 YJEFN3A6XGL0 299 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 E7ENQ6 273 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 LTFP02788 710 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 IRF1P10914 325 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NSFP46459 744 aaKnown RBP20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SLC7A9P82251 487 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 FMO1Q01740 532 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 EFEMP1Q12805 493 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 BSPRYQ5W0U4 402 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms