RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ATP11CQ8NB49 1132 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 MANSC1Q9H8J5 431 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 ELP3Q9H9T3 547 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 SLC5A4Q9NY91 659 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 C19orf81C9J6K1 198 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 LPXNO60711 386 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 TNNC2P02585 160 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
PTBP1-203ENST00000356948 RFC5P40937 340 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 SEPT7Q16181 437 aaKnown RBP15.89■□□□□ 0.13
PTBP1-203ENST00000356948 CDCA2Q69YH5 1023 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-203ENST00000356948 ACAP3Q96P50 834 aa15.89■□□□□ 0.13
PTBP1-203ENST00000356948 DDX56Q9NY93 547 aaKnown RBP15.89■□□□□ 0.13
PTBP1-203ENST00000356948 APRTP07741 180 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 PROZP22891 400 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 RABGGTBP53611 331 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 USP4Q13107 963 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 SLC10A6Q3KNW5 377 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 PMF1Q6P1K2 205 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.88■□□□□ 0.135e-12■■□□□ 14.1
PTBP1-203ENST00000356948 FAF2Q96CS3 445 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 ANKRD36BP1Q96IX9 119 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 DHRS4Q9BTZ2 278 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 LRMDAQ9H2I8 198 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 PFKMP08237 780 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 OLIG2Q13516 323 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 GLRA4Q5JXX5 417 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 PDIK1LQ8N165 341 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 CMASQ8NFW8 434 aaPredicted RBP15.88■□□□□ 0.13
PTBP1-203ENST00000356948 MMP19Q99542 508 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 CADM1Q9BY67 442 aaKnown RBP15.88■□□□□ 0.13
PTBP1-203ENST00000356948 RPF1Q9H9Y2 349 aaKnown RBP15.88■□□□□ 0.13
PTBP1-203ENST00000356948 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
PTBP1-203ENST00000356948 ZNF286BP0CG31 522 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 IER5Q5VY09 327 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 RINLQ6ZS11 566 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 ZBTB8OSQ8IWT0 167 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 RIBC1Q8N443 379 aaPredicted RBP15.88■□□□□ 0.13
PTBP1-203ENST00000356948 DNERQ8NFT8 737 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 DTX3LQ8TDB6 740 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 TMEM176AQ96HP8 235 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 NUDCD1Q96RS6 583 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 USP29Q9HBJ7 922 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 BATF3Q9NR55 127 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 DLGAP2Q9P1A6 1054 aa15.88■□□□□ 0.13
PTBP1-203ENST00000356948 ACKR2O00590 384 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 MAP3K13O43283 966 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 MT-ND3P03897 115 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 CCND1P24385 295 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 WDR60Q8WVS4 1066 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 TSPAN16Q9UKR8 245 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 CILPO75339 1184 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 METTL18O95568 372 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 EDNRBP24530 442 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 ADORA2AP29274 412 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 SH2D5Q6ZV89 423 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
PTBP1-203ENST00000356948 ACOT1Q86TX2 421 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 PQLC3Q8N755 202 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 CLPTM1LQ96KA5 538 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 TMEM120AQ9BXJ8 343 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 FZD8Q9H461 694 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 SLC24A2Q9UI40 661 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 GJD2Q9UKL4 321 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 TRIM49D1C9J1S8 452 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 APOC4-APOC2K7ER74 178 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 MCF2LO15068 1137 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 APOC2P02655 101 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 C1QAP02745 245 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 KRT7P08729 469 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 GBE1Q04446 702 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 SLC10A2Q12908 348 aaPredicted RBP15.87■□□□□ 0.13
PTBP1-203ENST00000356948 HADHQ16836 314 aaKnown RBP15.87■□□□□ 0.13
PTBP1-203ENST00000356948 CCDC14Q49A88 953 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 PPP1R26Q5T8A7 1209 aaPredicted RBP15.87■□□□□ 0.13
PTBP1-203ENST00000356948 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 SPNS2Q8IVW8 549 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 PYROXD2Q8N2H3 581 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 PLD5Q8N7P1 536 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 CCHCR1Q8TD31 782 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 TEKT4Q8WW24 435 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 BCO2Q9BYV7 579 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 TEX264Q9Y6I9 313 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 SIP14410 1827 aa15.87■□□□□ 0.13
PTBP1-203ENST00000356948 FZD9O00144 591 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 CNMDO75829 334 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 ETV4P43268 484 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 TUBP50607 506 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 SLC8A3P57103 927 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 ENPEPQ07075 957 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 ILDR2Q71H61 639 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 POLNQ7Z5Q5 900 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 CAND1Q86VP6 1230 aaKnown RBP15.86■□□□□ 0.13
PTBP1-203ENST00000356948 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 PCDH19Q8TAB3 1148 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 HPDLQ96IR7 371 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 DPEP3Q9H4B8 488 aa15.86■□□□□ 0.13
PTBP1-203ENST00000356948 ANK1P16157 1881 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms