RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 HMGCS2P54868 508 aa11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 METTL5Q9NRN9 209 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-202ENST00000356805 CDC42BPGQ6DT37 1551 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 GNG14A0A1W2PPG7 69 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 AGRPO00253 132 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF682O95780 498 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ASS1P00966 412 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF23P17027 643 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 CYP4Z1Q86W10 505 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 TBC1D10CQ8IV04 446 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 IZUMO1Q8IYV9 350 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 B3GALNT2Q8NCR0 500 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 MICAL3Q7RTP6 2002 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 A0A0A6YYK5 440 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 CD4P01730 458 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 WEE1P30291 646 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 GRK3P35626 688 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 XRCC4Q13426 336 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 FAM83EQ2M2I3 478 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 OSGEPL1Q9H4B0 414 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 SPANXN2Q5MJ10 180 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 NACC2Q96BF6 587 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 BTBD10Q9BSF8 475 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ATXN10Q9UBB4 475 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 RUVBL2Q9Y230 463 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 LOC100653049A0A140TA62 436 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 SOAT2O75908 522 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 KRT34O76011 436 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 PDHBP11177 359 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 STIP1P31948 543 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 DSG3P32926 999 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 SKIV2L2P42285 1042 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 XIAPP98170 497 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 PDK1Q15118 436 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 DGUOKQ16854 277 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 FAM45BPQ6NSW5 357 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 PGM2Q96G03 612 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 STON1Q9Y6Q2 735 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 F5H6K3 240 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 PSTPIP1O43586 416 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 GSTT1P30711 240 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 TALDO1P37837 337 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 KLRC3Q07444 240 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 NANOGNBQ7Z5D8 188 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 GLRA3O75311 464 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 TFE3P19532 575 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 TNFRSF8P28908 595 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 KRT73Q86Y46 540 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 FAM71DQ8N9W8 422 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 SCFD2Q8WU76 684 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 POP5Q969H6 163 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 CPDO75976 1380 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
SPTBN1-202ENST00000356805 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ALDH9A1P49189 494 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF333Q96JL9 665 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 SLC38A7Q9NVC3 462 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 MROH7Q68CQ1 1323 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 PALLDQ8WX93 1383 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CENPXA8MT69 81 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 KLHL17Q6TDP4 642 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CASKIN2Q8WXE0 1202 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 KLF6Q99612 283 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 H3BQF6 201 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZNF157P51786 506 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ITGA8P53708 1063 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ITGA1P56199 1179 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ZSWIM7Q19AV6 140 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CLYBLQ8N0X4 340 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 CARNMT1Q8N4J0 409 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 OR2W6PQ8NHA6 318 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 SERAC1Q96JX3 654 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 C9orf72Q96LT7 481 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 PLGRKTQ9HBL7 147 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 C2CD2Q9Y426 696 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 MGAT4DA6NG13 374 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 MAP2K7O14733 419 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 ENDOD1O94919 500 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 EXOSC10Q01780 885 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 DMPKQ09013 629 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 STX4Q12846 297 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 POMGNT2Q8NAT1 580 aa11.85□□□□□ -0.51
SPTBN1-202ENST00000356805 MOSPD2Q8NHP6 518 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms