RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 KRT31Q15323 416 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 PRAMEF13Q5VWM6 474 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 FAM160B1Q5W0V3 765 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 ISM2Q6H9L7 571 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 DCLRE1AQ6PJP8 1040 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 ABHD15Q6UXT9 468 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 DDX53Q86TM3 631 aaKnown RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 CNGA4Q8IV77 575 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 C12orf56Q8IXR9 622 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 RNF169Q8NCN4 708 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 ZBTB44Q8NCP5 570 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 SCFD1Q8WVM8 642 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 RSPH1Q8WYR4 309 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 GJA10Q969M2 543 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 PANX2Q96RD6 677 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 MYADMQ96S97 322 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 DUSP9Q99956 384 aaKnown RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 JPH2Q9BR39 696 aaPredicted RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 NUP58Q9BVL2 599 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 STRA6Q9BX79 667 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 RHOBTB2Q9BYZ6 727 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 KCTD10Q9H3F6 313 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 METTL14Q9HCE5 456 aaKnown RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 WDR6Q9NNW5 1121 aaKnown RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 PARD6AQ9NPB6 346 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 SAMSN1Q9NSI8 373 aaKnown RBP7.51□□□□□ -1.21
VPS13A-201ENST00000355766 PCDHB5Q9Y5E4 795 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 PKD1L2Q7Z442 2459 aa7.51□□□□□ -1.21
VPS13A-201ENST00000355766 A0A1W2PQJ5 194 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 GTPBP10A4D1E9 387 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 GFRA2O00451 464 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SLC30A4O14863 429 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 N4BP3O15049 544 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 KIAA0391O15091 583 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 CETN3O15182 167 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 HBP1O60381 514 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 GPR32O75388 356 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 C22orf31O95567 290 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 CBX7O95931 251 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 VTNP04004 478 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 GNA15P30679 374 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 COPB1P53618 953 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 STARD6P59095 220 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 RPS26P62854 115 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 MAPK7Q13164 816 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 DMP1Q13316 513 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SEPT6Q14141 434 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 PPP2R5AQ15172 486 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 MAN2A1Q16706 1144 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 FKBP15Q5T1M5 1219 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 CYP26C1Q6V0L0 522 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SFR1Q86XK3 245 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 IRF2BP1Q8IU81 584 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 FMNL3Q8IVF7 1028 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 LRRC8AQ8IWT6 810 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 ATRIPQ8WXE1 791 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 NELL1Q92832 810 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 IGSF21Q96ID5 467 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 KIRREL1Q96J84 757 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 CNOT6LQ96LI5 555 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 KLHL5Q96PQ7 755 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 ERGIC2Q96RQ1 377 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 FIZ1Q96SL8 496 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 NTPCRQ9BSD7 190 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 VN1R3Q9BXE9 311 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 EDEM3Q9BZQ6 932 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 MRPL44Q9H9J2 332 aaKnown RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SPTLC3Q9NUV7 552 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 INTS13Q9NVM9 706 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 SPATA6Q9NWH7 488 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 ZSCAN32Q9NX65 697 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 TBC1D7Q9P0N9 293 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 WRAP73Q9P2S5 460 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 GMEB2Q9UKD1 530 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 ANGPTL2Q9UKU9 493 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 EXOC7Q9UPT5 735 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS13A-201ENST00000355766 FAM208BQ5VWN6 2430 aa7.5□□□□□ -1.21
VPS13A-201ENST00000355766 A0A0U1RQF3 1178 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 GOLGA6L9A6NEM1 432 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 ANHXE9PGG2 379 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 KIF2AO00139 706 aaPredicted RBP7.49□□□□□ -1.21
VPS13A-201ENST00000355766 ARHGAP6O43182 974 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 TBC1D4O60343 1298 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 STX10O60499 249 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 GLI1P08151 1106 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 CNPP09543 421 aaKnown RBP7.49□□□□□ -1.21
VPS13A-201ENST00000355766 KLRC2P26717 231 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 MAGEA9P43362 315 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 PMS1P54277 932 aaKnown RBP7.49□□□□□ -1.21
VPS13A-201ENST00000355766 NCKAP1LP55160 1127 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 STX17P56962 302 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 GTF2BQ00403 316 aa7.49□□□□□ -1.21
VPS13A-201ENST00000355766 PRKCEQ02156 737 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms