RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 HECTD3Q5T447 861 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 PHTF2Q8N3S3 785 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 SYNPOQ8N3V7 929 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 RPLP0P6Q8NHW5 317 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 LMO3Q8TAP4 145 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 NDRG1Q92597 394 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 RUBCNQ92622 972 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 HHIPQ96QV1 700 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 TSG101Q99816 390 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 KLF16Q9BXK1 252 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 CTNND2Q9UQB3 1225 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 DMXL1Q9Y485 3027 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 SDK1Q7Z5N4 2213 aa17.67■□□□□ 0.42
PDLIM7-201ENST00000355572 TRIM24O15164 1050 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 TLR5O60602 858 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 NFATC1O95644 943 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 KIF11P52732 1056 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 LRRC63Q05C16 580 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 LY6G5CQ5SRR4 150 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 RMDN1Q96DB5 314 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 DUSP16Q9BY84 665 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 FAM126AQ9BYI3 521 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 COMMD8Q9NX08 183 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 HCN2Q9UL51 889 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
PDLIM7-201ENST00000355572 RNF225M0QZC1 329 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 GABBR2O75899 941 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 DRD1P21728 446 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 FMO5P49326 533 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 TUBP50607 506 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 PDE6CP51160 858 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 SEC13P55735 322 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 CUL2Q13617 745 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 EMC10Q5UCC4 262 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 BHLHA9Q7RTU4 235 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 LONP2Q86WA8 852 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 TMEM176AQ96HP8 235 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 DHTKD1Q96HY7 919 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 HEXIM2Q96MH2 286 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 HINFPQ9BQA5 517 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 CYLDQ9NQC7 956 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 ARMCX3Q9UH62 379 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 TNRC6BQ9UPQ9 1833 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 ABCA7Q8IZY2 2146 aa17.65■□□□□ 0.42
PDLIM7-201ENST00000355572 NUP205Q92621 2012 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 E2F8A0AVK6 867 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 KDSRQ06136 332 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 ARHGAP17Q68EM7 881 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 PRR23BQ6ZRT6 265 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 TMEM25Q86YD3 366 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 ARHGEF19Q8IW93 802 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 NAT16Q8N8M0 369 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 USP33Q8TEY7 942 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 NCDNQ9UBB6 729 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 CEP192Q8TEP8 1941 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 THADAQ6YHU6 1953 aa17.64■□□□□ 0.41
PDLIM7-201ENST00000355572 PSMA7O14818 248 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 ADH5P11766 374 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 RARGP13631 454 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 HOXA6P31267 233 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 NRLP54845 237 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 CAMK4Q16566 473 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 C2orf27AQ580R0 203 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 RAB41Q5JT25 222 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 ETFBKMTQ8IXQ9 262 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 CCDC33Q8N5R6 958 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 CCDC150Q8NCX0 1101 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 FBXO44Q9H4M3 255 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 PNPLA8Q9NP80 782 aa17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 TLR8Q9NR97 1041 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-201ENST00000355572 PLXND1Q9Y4D7 1925 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 WDR87Q6ZQQ6 2873 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 STX10O60499 249 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 KLKB1P03952 638 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 PDE4CQ08493 712 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 NR1H3Q13133 447 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 SIM2Q14190 667 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 DMC1Q14565 340 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 TMEM92Q6UXU6 159 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 FAM160A2Q8N612 972 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 CEP63Q96MT8 703 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 TSPAN16Q9UKR8 245 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
PDLIM7-201ENST00000355572 DNAH14Q0VDD8 3507 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 DCLK1O15075 740 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 KIR2DL1P43626 348 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms