RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 FAM172AQ8WUF8 416 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 NAP1L3Q99457 506 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 CRISPLD1Q9H336 500 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 DDX56Q9NY93 547 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 LAMA3Q16787 3333 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 LCHNA4D1U4 455 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 LILRB3O75022 631 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ZRANB2O95218 330 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 FGGP02679 453 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 LTFP02788 710 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 IL1R2P27930 398 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 HDAC4P56524 1084 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 DUSP4Q13115 394 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 DDR2Q16832 855 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 CDO1Q16878 200 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 DCAF6Q58WW2 860 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 TXNRD3NBQ6F5E7 133 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 AADACL2Q6P093 401 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 HFE2Q6ZVN8 426 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 STRADAQ7RTN6 431 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 TTC9BQ8N6N2 239 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 KLHL23Q8NBE8 558 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SPATA17Q96L03 361 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 NPY6RQ99463 290 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 TRIM62Q9BVG3 475 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 MRPL17Q9NRX2 175 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 IL37Q9NZH6 218 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 FNIP2Q9P278 1114 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 AFF4Q9UHB7 1163 aaKnown RBP10.05□□□□□ -0.8
NPHP1-202ENST00000355301 STAP1Q9ULZ2 295 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 SLC27A5Q9Y2P5 690 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 NR2E3Q9Y5X4 410 aa10.05□□□□□ -0.8
NPHP1-202ENST00000355301 UQCRHLA0A096LP55 91 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 FAM92AA1XBS5 289 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 PRPSAP2O60256 369 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 ENDOD1O94919 500 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 TRUB2O95900 331 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 UQCRHP07919 91 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 CTSAP10619 480 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 ATF2P15336 505 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 TFE3P19532 575 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 BMPR1AP36894 532 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 MAGEA10P43363 369 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 TUFMP49411 452 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 GPR15P49685 360 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RPL10AP62906 217 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 CREMQ03060 361 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RAB33AQ14088 237 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 MGAT5BQ3V5L5 792 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 ATP13A4Q4VNC1 1196 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RAB6CQ53S08 254 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 C9orf50Q5SZB4 431 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 SYPL2Q5VXT5 272 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 NOA1Q8NC60 698 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 CMASQ8NFW8 434 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 UBXN4Q92575 508 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RBM41Q96IZ5 413 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 TBCBQ99426 244 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 SEPT5Q99719 369 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RAB6CQ9H0N0 254 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 FBXO44Q9H4M3 255 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RXFP1Q9HBX9 757 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
NPHP1-202ENST00000355301 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 SCML2Q9UQR0 700 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 SSX2IPQ9Y2D8 614 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
NPHP1-202ENST00000355301 LINC01553A4QN01 128 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 CAPN9O14815 690 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 NCAM1P13591 858 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 GJC1P36383 396 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 COPS2P61201 443 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 LONRF2Q1L5Z9 754 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 SMTNL2Q2TAL5 461 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 BOLA3Q53S33 107 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 SDHAF4Q5VUM1 108 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 OTUD1Q5VV17 481 aaPredicted RBP10.03□□□□□ -0.8
NPHP1-202ENST00000355301 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
NPHP1-202ENST00000355301 MON1AQ86VX9 555 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms