RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 SH3PXD2AQ5TCZ1 1133 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 THEM5Q8N1Q8 247 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CLEC4CQ8WTT0 213 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CASD1Q96PB1 797 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 RNF157Q96PX1 679 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 HINFPQ9BQA5 517 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 EPB41L4BQ9H329 900 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 ZWILCHQ9H900 591 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 PCDH9Q9HC56 1237 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 KRT82Q9NSB4 513 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 MTRF1LQ9UGC7 380 aaKnown RBP17.99■□□□□ 0.47
VPS13B-201ENST00000355155 MICAL3Q7RTP6 2002 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 B4GALT3O60512 393 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 EFEMP2O95967 443 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 SLMAPQ14BN4 828 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 FBXO25Q8TCJ0 367 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 RTP4Q96DX8 246 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 TMEM109Q9BVC6 243 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 OXCT2Q9BYC2 517 aaPredicted RBP17.98■□□□□ 0.47
VPS13B-201ENST00000355155 ADAM33Q9BZ11 813 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 ZCWPW1Q9H0M4 648 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 PCDH18Q9HCL0 1135 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 DNPEPQ9ULA0 475 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 CLDN5O00501 218 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 GGCXP38435 758 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 ADIGQ0VDE8 80 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 NOMO1Q15155 1222 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 CEP128Q6ZU80 1094 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 SNRNP25Q9BV90 132 aaKnown RBP17.98■□□□□ 0.47
VPS13B-201ENST00000355155 KLHL11Q9NVR0 708 aa17.98■□□□□ 0.47
VPS13B-201ENST00000355155 VWA8A3KMH1 1905 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.97■□□□□ 0.47
VPS13B-201ENST00000355155 RARGP13631 454 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 LCP1P13796 627 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 BRCC3P46736 316 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 YWHAZP63104 245 aaKnown RBP17.97■□□□□ 0.47
VPS13B-201ENST00000355155 SCAPQ12770 1279 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 PPP1R7Q15435 360 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 HIBCHQ6NVY1 386 aaPredicted RBP17.97■□□□□ 0.47
VPS13B-201ENST00000355155 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 NTAN1Q96AB6 310 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 SF3B1O75533 1304 aaKnown RBP eCLIP17.97■□□□□ 0.475e-6■■■■■ 53.8
VPS13B-201ENST00000355155 TTC3P53804 2025 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 SMAPO00193 183 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 AP1G2O75843 785 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 OVOS1Q6IE37 1185 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 OR10T2Q8NGX3 314 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 TRIM62Q9BVG3 475 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 PLEKHA4Q9H4M7 779 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 POPDC2Q9HBU9 364 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 LRRC4Q9HBW1 653 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 FZD10Q9ULW2 581 aa17.97■□□□□ 0.47
VPS13B-201ENST00000355155 FYNP06241 537 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 CD48P09326 243 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 L1CAMP32004 1257 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 GJC1P36383 396 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 EIF3BP55884 814 aaKnown RBP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 EIF4EBP2Q13542 120 aaPredicted RBP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 ODF2Q5BJF6 829 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 ZNF280BQ86YH2 543 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 MED10Q9BTT4 135 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 TMEM30AQ9NV96 361 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 PSD3Q9NYI0 1048 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 CST8O60676 142 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 ZNF135P52742 658 aaPredicted RBP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 CBX1P83916 185 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 RAB6CQ53S08 254 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 ANKLE1Q8NAG6 615 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 RAB6CQ9H0N0 254 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 PABPC3Q9H361 631 aaKnown RBP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS13B-201ENST00000355155 PCSK1NQ9UHG2 260 aa17.96■□□□□ 0.47
VPS13B-201ENST00000355155 KRT14P02533 472 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ZFXP17010 805 aaPredicted RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 RFC2P35250 354 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 TKTL1P51854 596 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 HTRA3P83110 453 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 MTFR1Q15390 333 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 SMTNL2Q2TAL5 461 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 HSP90B2PQ58FF3 399 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 KCNT1Q5JUK3 1230 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 TRMT10CQ7L0Y3 403 aaKnown RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 NPAS4Q8IUM7 802 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 DEFB106AQ8N104 65 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 DBF4BQ8NFT6 615 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 MRPL9Q9BYD2 267 aaKnown RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 DMAP1Q9NPF5 467 aaPredicted RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 STAP1Q9ULZ2 295 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 SCN5AQ14524 2016 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 PIK3R2O00459 728 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 DNALI1O14645 258 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms