RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GPR142Q7Z601 462 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 FAM172AQ8WUF8 416 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 PIWIL1Q96J94 861 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 MAML3Q96JK9 1138 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 USP29Q9HBJ7 922 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 NGRNQ9NPE2 291 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 PHTF1Q9UMS5 762 aa23.2■■□□□ 1.3
NKX2-1-201ENST00000354822 BCLAF3A2AJT9 711 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 SLC9A4Q6AI14 798 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 MAGEC3Q8TD91 643 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 FAF2Q96CS3 445 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 ZMAT2Q96NC0 199 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 WDR83Q9BRX9 315 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 ZNF670Q9BS34 389 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 TINF2Q9BSI4 451 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 KAT6AQ92794 2004 aa23.19■■□□□ 1.3
NKX2-1-201ENST00000354822 TM9SF1O15321 606 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 TOMM70O94826 608 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 ELF3P78545 371 aaPredicted RBP23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 GRB14Q14449 540 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 SEPT7Q16181 437 aaKnown RBP23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 C1orf228Q6PIY5 440 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 ARCQ7LC44 396 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 KHSRPQ92945 711 aaKnown RBP eCLIP23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 PARK7Q99497 189 aaKnown RBP23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 PCDH18Q9HCL0 1135 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 SETD4Q9NVD3 440 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 TEX264Q9Y6I9 313 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 IQANK1A0A1B0GTG1 560 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 SCNN1AP37088 669 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 DNAJC3Q13217 504 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 SPRYD7Q5W111 196 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 FAM47EQ6ZV65 393 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 SCUBE3Q8IX30 993 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 TAB3Q8N5C8 712 aaPredicted RBP23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 FITM2Q8N6M3 262 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 C2orf69Q8N8R5 385 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 DCAKDQ8WVC6 231 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 TSPAN18Q96SJ8 248 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 ECT2Q9H8V3 914 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 CYLDQ9NQC7 956 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 IKBKGQ9Y6K9 419 aa23.18■■□□□ 1.3
NKX2-1-201ENST00000354822 GPR32O75388 356 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 CAPN15O75808 1086 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 ECM2O94769 699 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 ELK3P41970 407 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 SKIV2L2P42285 1042 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 PTPN9P43378 593 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 SLC1A5Q15758 541 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 RAB6CQ53S08 254 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 ALKAL1Q6UXT8 129 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 OR6B3Q8NGW1 331 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 RAB6CQ9H0N0 254 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 CNTN3Q9P232 1028 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 UBQLN1Q9UMX0 589 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 NRCAMQ92823 1304 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 KCNN4O15554 427 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 PAPSS1O43252 624 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 EDF1O60869 148 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 CD4P01730 458 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 ZFXP17010 805 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 AXLP30530 894 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 NCALDP61601 193 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 C9orf57Q5W0N0 161 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 LVRNQ6Q4G3 990 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 PLEKHH3Q7Z736 793 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 PQLC3Q8N755 202 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 MZB1Q8WU39 189 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 PNPLA8Q9NP80 782 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 RAB6BQ9NRW1 208 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 FAM49BQ9NUQ9 324 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 GGT7Q9UJ14 662 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 CHMP2BQ9UQN3 213 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 USH1CQ9Y6N9 552 aa23.17■■□□□ 1.3
NKX2-1-201ENST00000354822 SMIM35A0A1B0GVV1 85 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 ZBED1O96006 694 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 ALDH3A1P30838 453 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 PCDH19Q8TAB3 1148 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 SNRNP25Q9BV90 132 aaKnown RBP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 TRIM6Q9C030 488 aaPredicted RBP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 KLC2Q9H0B6 622 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 GINS2Q9Y248 185 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 A8MXQ7 604 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 ZNF200P98182 395 aaPredicted RBP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 RIPK1Q13546 671 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 EFTUD2Q15029 972 aaKnown RBP eCLIP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 SETDB1Q15047 1291 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 FAM110CQ1W6H9 321 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 ECHDC2Q86YB7 292 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 CRYBG2Q8N1P7 616 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 ANKRD52Q8NB46 1076 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 RMDN2Q96LZ7 410 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 EIF2AQ9BY44 585 aaKnown RBP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 FAM49AQ9H0Q0 323 aaPredicted RBP23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 TUBGCP4Q9UGJ1 667 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 HEY1Q9Y5J3 304 aa23.16■■□□□ 1.3
NKX2-1-201ENST00000354822 RALGAPA2Q2PPJ7 1873 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 PPEF2O14830 753 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 ATP5HO75947 161 aa23.15■■□□□ 1.3
NKX2-1-201ENST00000354822 NQO1P15559 274 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms