RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SGSM3Q96HU1 749 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 TNKS2Q9H2K2 1166 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ARL5CA6NH57 179 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 TMCC2O75069 709 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 FCGR1AP12314 374 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 TBXAS1P24557 533 aaPredicted RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 BNC2Q6ZN30 1099 aaPredicted RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 USP13Q92995 863 aaPredicted RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 RACGAP1Q9H0H5 632 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 GNG14A0A1W2PPG7 69 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 HAT1O14929 419 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 SSTP61278 116 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 TCHHL1Q5QJ38 904 aaPredicted RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 RNF44Q7L0R7 432 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 PAGE5Q96GU1 130 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 BPIFA3Q9BQP9 254 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 MYRFQ9Y2G1 1151 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 GAS2O43903 313 aaKnown RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 THRAP10827 490 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 NUMBP49757 651 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 CORO7P57737 925 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ARL6IP4Q66PJ3 421 aaKnown RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 CATSPER4Q7RTX7 472 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 FIG4Q92562 907 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ERBB3P21860 1342 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 MYOM2P54296 1465 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 FAM98BQ52LJ0 330 aaKnown RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 RNPC3Q96LT9 517 aaKnown RBP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ERVK-10P10266 1014 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ALDH9A1P49189 494 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 RAB25P57735 213 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 NT5DC4Q86YG4 428 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 RBM15Q96T37 977 aaKnown RBP eCLIP8.28□□□□□ -1.08
SCN8A-201ENST00000354534 LRRC1Q9BTT6 524 aa8.28□□□□□ -1.08
SCN8A-201ENST00000354534 ASB14A6NK59 587 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 PSMD14O00487 310 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 CRKP46108 304 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 DEFA5Q01523 94 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 SHQ1Q6PI26 577 aaKnown RBP8.27□□□□□ -1.08
SCN8A-201ENST00000354534 TRIM72Q6ZMU5 477 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 SPATA4Q8NEY3 305 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 MAGEE2Q8TD90 523 aaPredicted RBP8.27□□□□□ -1.08
SCN8A-201ENST00000354534 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 DNMT1P26358 1616 aaKnown RBP8.27□□□□□ -1.08
SCN8A-201ENST00000354534 ASNSP08243 561 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 CACNB3P54284 484 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 OVGP1Q12889 678 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 ATP6AP1LQ52LC2 224 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 OR7A2PQ8NGA2 310 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 RIBC2Q9H4K1 309 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 IRAK3Q9Y616 596 aa8.27□□□□□ -1.08
SCN8A-201ENST00000354534 TFECO14948 347 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CPB1P15086 417 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 FGFR3P22607 806 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 FAM98CQ17RN3 349 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 LRRC20Q8TCA0 184 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 ING5Q8WYH8 240 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 IP6K1Q92551 441 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 RPAP1Q9BWH6 1393 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 A0A0D9SFI3 127 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 METTL21EPA6NDL7 271 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 BHMG1C9JSJ3 638 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 FOXN3O00409 490 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CCNE1P24864 410 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 BCAMP50895 628 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 MTM1Q13496 603 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CAMK2GQ13555 558 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 HMBOX1Q6NT76 420 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 ISLR2Q6UXK2 745 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 SRPRBQ9Y5M8 271 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 SOAT2O75908 522 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 TTLL1O95922 423 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 ADAM17P78536 824 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 RASSF1Q9NS23 344 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 OR14I1A6ND48 311 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 VAMP7P51809 220 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 RPP38P78345 283 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 TUBA3CQ13748 450 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 ZFP69Q49AA0 526 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 AGBL2Q5U5Z8 902 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 MIGA2Q7L4E1 593 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 BRSK2Q8IWQ3 736 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 PABPC5Q96DU9 382 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC86Q9H6F5 360 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 VTI1BQ9UEU0 232 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 HEATR9A2RTY3 570 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 TRIM64A6NGJ6 449 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 INPP4BO15327 924 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 APBA3O96018 575 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 SNRPAP09012 282 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 IL12AP29459 219 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms